Gossypium raimondii: 128032009
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Entry
128032009 CDS
T04129
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
128032009
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
128032009
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
128032009
NCBI-ProteinID:
XP_052488090
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Position
6:54044084..54045313
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AA seq
378 aa
AA seq
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MATTLSRCFTLALFMVILMASPSSSLANMNVIDKCWRRNPLWGSQRQQLAKCSVGFVGKM
INNIGKDVVKYKVIDPSDDPLIPKSGTLRYGTKMIKGKVWITFKNSMTITLQRPLLLSSF
TAIDGRGVDVHIIGFGCLLVYQATDIIIHGLHIHHCKAQPPSTVMGPNAKVIPLGQMDGD
AIRLVTTRKVWIDHNTLHECQDGLLDVTRGSTNITVSNNWFRNQDKAMLLGHDDGHLRDK
NMKVTVIFNHFGPNGNQRMPRVLHGYAHVANNFYQGWEQYAIGGSMSPSIKSEANFFVAP
NDVGNKEVTWRKGEKGLWKFYSVGDVFKNGASFNKQTCVGGAKPNYNQEQNFKVVDDGSV
KKLTSESGVLRCSRSLIC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacattatcacgttgcttcacattagcccttttcatggtcattctaatggca
agtccgagttcgagtttggctaatatgaatgtaattgataaatgttggagacggaaccct
ctttggggaagtcaacgacaacaattagccaaatgctccgtcggttttgtcggcaaaatg
atcaacaacattggtaaagacgtcgtgaaatacaaggttattgatccttccgacgaccct
ttgattcctaaatcagggacccttcgctatggaacaaaaatgatcaaaggaaaagtatgg
atcacattcaaaaatagcatgaccatcacactccaaagaccacttcttttaagcagcttc
actgccattgacggtcgtggcgtcgatgtccacataatcggctttggatgtctattggtg
taccaagcgaccgatataatcatccatgggcttcacatccaccattgcaaggcccaacca
cctagcactgtgatgggtccaaacgcgaaggtgatccctttaggccaaatggatggagac
gctataagattggtcaccacaagaaaagtgtggatcgatcataacacattgcatgagtgc
caggacggcctcctcgatgtcactcgcggttccaccaacatcaccgtgtcgaacaactgg
ttcaggaaccaagacaaagctatgctcctcggacacgatgatggtcatttgagagacaaa
aacatgaaggtcactgtcattttcaaccatttcggacctaacggcaaccaaagaatgcca
agagttctccatggatatgcacacgtagcgaacaatttctaccaagggtgggaacaatat
gccatcggtggtagcatgagccctagcatcaagagtgaggccaattttttcgttgctccg
aatgatgttgggaacaaagaggttacatggagaaaaggagagaaaggtttatggaaattt
tattcagtaggggatgtatttaaaaatggagcatctttcaataagcaaacatgtgtaggt
ggagctaagcctaactataaccaagaacaaaattttaaggttgtcgatgatggatctgtt
aagaaattgacaagtgaatctggtgttttacgatgctccagaagtttaatatgttga
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