Granulicella sp. 5B5: GOB94_01155
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Entry
GOB94_01155 CDS
T08433
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
grb
Granulicella sp. 5B5
Pathway
grb03030
DNA replication
grb03430
Mismatch repair
grb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOB94_01155 (dnaE)
03430 Mismatch repair
GOB94_01155 (dnaE)
03440 Homologous recombination
GOB94_01155 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
grb03032
]
GOB94_01155 (dnaE)
03400 DNA repair and recombination proteins [BR:
grb03400
]
GOB94_01155 (dnaE)
Enzymes [BR:
grb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GOB94_01155 (dnaE)
DNA replication proteins [BR:
grb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GOB94_01155 (dnaE)
DNA repair and recombination proteins [BR:
grb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GOB94_01155 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
RE_TaqI
Motif
Other DBs
NCBI-ProteinID:
QMV17471
UniProt:
A0A7D7XGP6
LinkDB
All DBs
Position
282256..285777
Genome browser
AA seq
1173 aa
AA seq
DB search
MAAEFTHLHLHTDYSLLDGACDVDKLAAHLSKIGQTSAAMTDHGNIFGAVHFFDAMKKKN
LKPILGCELYICKEEDHRTKPEADSKYNHLLVLAENEEGYRNLVRLTSEAALHGFYRKPR
VSKNFLAKHAEGLIGFSGCLAGEVSQHIMAGNYDKAKQTAGDLETIFGRGNFFLEIQDHG
LQPDKAVTEAMFRLEKDLDIPLIATNDSHYIEDQDSRAHEILLCVQTAGSMNDPKRFKFD
TNEFYIKSADEMHRLFAHAPETCTRTMQFPERCQLELKKVKDPFPKFECPDGLTLDDYFE
QVCREGWRKRRETAVAHLESTGKLRKSIADYEARLTREINTIKQMKFPGYFMIVWDFIRY
AREQGIPVGPGRGSAAGSLVAYVMEITDIDPLQNDLLFERFLNPERISMPDIDIDFDMNR
RGEVIEYVRRKYGNDQVAQIITFNTMAAKAAIKDVGRALDMPYGEVDRIAKLIPTTIGIT
IEQALKDNPLLATAYDDPKIRELIDTAMRLEGLVRGAGVHAAGVVIAPQPLTELVPVTRT
KDEAIVTSYDMKAVEKMGLLKMDFLGLTTLTVIDDCLKLIHSNRGETVDLATIDLEDTAT
FEKVFHRALTSGVFQFESGGMRDVLRRYKPNSIEHLTALNALYRPGPMSMIDDFIERKWG
RSEVAYTVPELEPLLKETLGVMVYQEQVMQISNVIGGYSLGGADLLRRAMGKKDAAEMEK
QRAIFLAGATERKFPKAAAGEIFDQMAKFAGYGFNKSHSAAYSLLAYHTAWLKTHYPVEF
MAALLTSETSKPENVVKYIGECKEINIAVVPPDVQVSAASFTPKGDSIVFGLAAIKNVGH
NAIESIITARNELQAAGKPGFSSLWEFCEKIDLRLMNKRVLESLCKAGALDAFGPRARVF
AALDKAIERAQKSQKDAAAGQHGLFGMFDDPGPANASEDALPPAPDWDEHTRLQNEKDVL
GFFVSGHPMDRYREKLRNMKVVDTATACEMKPEPVVFQRGRREEGSNEIQIAGVITGLKV
AKSKRSGEMYASAALEDTVGKIELIAFPAAYEKLAEKLKIDVPVLVRGSLRGDEDAAPKL
AISAITALEDVKIKLPEALRIRVPLHSPDTELLPKLRAIFQSSPGTGKLMLRLEEPDQFQ
ADLETHGLNVAADVAFIENVEALVGRGAVQIIA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgagttcacgcacctccacctccacaccgactactcactcctcgatggcgcc
tgcgacgtcgacaagctcgccgcccacctcagcaagatcggtcagacctccgccgccatg
accgaccacggcaacatcttcggtgccgtgcacttcttcgacgccatgaagaagaagaac
ctcaagcccatcctcggctgcgagctctacatctgcaaagaggaggaccaccgcaccaag
cctgaggccgactccaagtacaaccacctcctcgtcctcgccgaaaatgaagagggctac
cgcaatctcgtccgcctcacctcggaggccgctctgcacggcttctaccgcaagccgcgc
gtcagcaaaaacttcctcgccaaacacgccgaaggcctcatcggcttctccggctgcctc
gcaggcgaggtctcccagcacatcatggcagggaactacgacaaggcgaagcagaccgct
ggcgacctcgaaaccatcttcggccgcggcaacttcttcctcgagatccaggaccacggc
ctgcaacccgacaaggccgtcaccgaggccatgttccgcctcgaaaaagacctcgacatc
cccctcattgccaccaacgactcgcactacatcgaagaccaggactcccgcgcccacgag
atcctcctctgcgtgcagaccgctggcagcatgaacgaccccaaacgcttcaagttcgac
accaacgagttctacatcaagtccgccgacgagatgcaccgcctcttcgcgcacgcgccc
gaaacctgtacccgcaccatgcagtttccggagcgctgccagcttgagctcaagaaagtc
aaagacccgttccccaagttcgagtgccctgacggcctcaccctcgacgactacttcgag
caggtctgccgcgagggttggcgcaagcgccgcgaaaccgccgtcgcccacctcgaatcc
accggcaagctccgcaagtccatcgccgactacgaagcccgcctcacccgcgagatcaac
accatcaagcagatgaagttccccggctacttcatgattgtctgggacttcatccgctac
gcccgcgagcagggaatcccagtcggccccggccgtggctccgcagcaggctcgctcgtc
gcctacgtcatggagatcaccgacatcgatcccctccagaacgatctcctcttcgagcgc
ttcctcaaccccgaacgcatctccatgcccgatatcgacatcgacttcgatatgaaccgt
cgcggcgaagtcatcgaatacgtccgccgcaagtacggcaacgatcaggtcgcgcagatc
atcaccttcaacaccatggctgccaaagccgccatcaaggacgtaggtcgcgcgctcgac
atgccctacggcgaagtcgatcgcatcgccaagctcatccccactaccatcggcatcacc
atcgagcaggccctcaaggacaacccactcctcgccaccgcctacgacgatcccaagatc
cgcgaactcatcgacaccgccatgcgcctcgaaggcctcgtccgtggcgcaggcgtccac
gccgctggcgtcgtcatcgcgccgcagcctctcactgagctcgtccccgtcacccgcacc
aaggacgaggccatcgtcaccagctatgacatgaaggccgtcgagaagatgggcctgctc
aagatggacttccttgggctcaccacgctcaccgtcatcgacgactgcctcaagctcatc
cactccaaccgcggcgaaaccgtcgacctcgccaccatcgacctcgaagacaccgccacc
tttgagaaggtcttccaccgcgcactcaccagcggagtcttccagtttgaatccggcggc
atgcgagatgtccttcgccgctacaagcccaactccatcgagcacctcaccgcgctcaac
gctctctatcgtcccggccccatgtccatgatcgacgacttcatcgagcgcaagtgggga
cgcagcgaagtcgcttacaccgttcccgaactcgaaccgctcctcaaagagaccctcggc
gtcatggtctaccaggagcaggtcatgcagatctccaacgtcatcggcggctactcgctc
ggtggcgccgacctcctccgccgcgcgatgggtaaaaaagacgccgccgagatggagaag
cagcgcgccatcttcctcgccggcgccaccgagcgcaagtttcccaaggcggccgcgggc
gaaatctttgaccagatggccaagttcgccggctacggcttcaacaagtcgcactccgcc
gcctactcgttgctcgcctaccataccgcctggctcaagacccactacccggtcgagttc
atggccgcgctgctcacctcagaaaccagcaagcccgaaaacgtcgtcaagtacatcggc
gagtgcaaggagatcaacatcgccgtcgtcccgcccgacgtgcaggtctccgccgccagc
ttcacccccaagggcgacagcatcgtcttcggccttgccgccatcaagaacgtcggccac
aacgccatcgagtccatcatcaccgcacgcaatgaactccaggcagcagggaagcccggc
ttcagttctctctgggagttctgcgaaaagatcgacctccgcctcatgaacaagcgcgtg
ctcgagtccctctgcaaagccggagcactcgacgccttcggtccacgcgcccgcgtcttc
gcggctctcgacaaggccatcgaacgcgcccagaaatcgcagaaggacgccgccgccggc
cagcacggcctcttcggtatgttcgacgaccccggccccgccaacgccagcgaagacgcg
cttccacccgcacccgactgggacgagcacacccgcctccagaacgagaaggacgtcctc
ggcttcttcgtctccggccaccccatggaccgctaccgcgaaaagctccgcaatatgaag
gtcgtcgacaccgctaccgcctgcgagatgaagcccgagcccgtcgtcttccagcgcggc
cgccgcgaagagggaagtaacgagatccagatcgccggcgtcatcaccggcctcaaggtc
gccaaatccaaacgctccggagagatgtacgcctccgccgcgctcgaagacaccgtcggc
aagatcgagcttatcgccttccccgcagcctacgaaaagctcgccgaaaagctcaagatc
gacgtccccgtcctcgtccgcggctcgctccgcggagacgaagacgccgcccccaagctc
gccatcagcgccatcacagcgctcgaagacgtcaagatcaagctccccgaagccctccgc
atccgcgtcccgctgcacagtccggacaccgagctcctgccgaaactccgcgcgatcttc
cagtcctcacccggcaccggcaagctcatgctccgcctcgaagaacccgaccagtttcaa
gccgacctcgaaacccacggcctcaacgtagccgccgacgtagccttcatcgaaaacgtc
gaagccctcgtaggccgcggagccgtccagatcatcgcctga
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