Granulicella sp. 5B5: GOB94_01420
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Entry
GOB94_01420 CDS
T08433
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
grb
Granulicella sp. 5B5
Pathway
grb02020
Two-component system
grb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GOB94_01420
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GOB94_01420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grb03021
]
GOB94_01420
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
grb02035
]
GOB94_01420
Transcription machinery [BR:
grb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GOB94_01420
Bacterial motility proteins [BR:
grb02035
]
Flagellar system
Flagellar assembly proteins
Stator
GOB94_01420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
GerE
MarR_2
Rv2175c_wHTH
SatD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QMV17515
LinkDB
All DBs
Position
complement(332496..333293)
Genome browser
AA seq
265 aa
AA seq
DB search
MESQRSIGMTELERAYQACDESLDERSGIMMKELTQVYYIAARIHERLPKHVEIGDLVSA
GVLGLIEACAKYDGSRDVSFATFAKFRIRGAIIDSLRNLDWGSRALRRQSRAIAASTTKL
TSLLGRHPLQEEIAGDLDLSLSELHATLHEIDGLSVMGQQVVSRDGVTEPHDLIESAASR
DHQDPFDLCLQAEMCAHLASALQTLSEREQMILSLYYQEELTMREVAEVLDIGTSRVSQI
ISSSLKKLRTELRHLQHTSQSQIPG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaaaggagtatcggcatgacggagttggagagagcatatcaggcctgcgac
gagagtcttgatgagcgcagcggcatcatgatgaaggagcttacacaggtttactacatt
gcagctcgtatccatgagcggcttcctaagcatgttgagatcggcgatctggtgagcgct
ggcgtgctgggccttatcgaagcgtgtgctaaatatgatggatcgagagatgtaagcttt
gccacttttgcgaagtttcgcatccgaggcgccattatcgacagcctgcggaacctcgac
tggggttcacgagctctgcgtcgccagagtcgagctattgccgcttccaccacgaaattg
acttccctactaggcaggcacccgctacaggaagagatagctggagatcttgatctatcc
ctttctgagctccacgctaccctgcacgagatcgacggcctatccgtcatggggcagcag
gttgtgtcgagagatggcgtgacagagccacatgacttgattgaatccgcagcgagccgc
gatcatcaagaccccttcgacctctgtttacaggctgagatgtgcgctcatctggcgtca
gcactacagacactctccgaacgcgaacagatgattctctctctttattatcaggaagaa
ctcacaatgcgtgaagtggctgaagtgctagatataggtacctcgcgtgtctcgcaaatc
atttcttcatcgctgaagaagcttcgcactgagttgcgtcatctccaacacacatctcaa
tcacagatacccggctga
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