Granulicella sp. 5B5: GOB94_02320
Help
Entry
GOB94_02320 CDS
T08433
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
grb
Granulicella sp. 5B5
Pathway
grb00300
Lysine biosynthesis
grb00470
D-Amino acid metabolism
grb01100
Metabolic pathways
grb01110
Biosynthesis of secondary metabolites
grb01120
Microbial metabolism in diverse environments
grb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GOB94_02320 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GOB94_02320 (dapF)
Enzymes [BR:
grb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GOB94_02320 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
FKBP26_C
Motif
Other DBs
NCBI-ProteinID:
QMV17665
LinkDB
All DBs
Position
complement(535836..536651)
Genome browser
AA seq
271 aa
AA seq
DB search
MGSVKFVKAHACGNDFLVIEETVARGRHAAMARKLCARNTGIGADGIEFLDRRADGSLFL
RLFNADGSEAELSGNGTRCVAAWLAASEGRESVTLGTHGGLRTCRVVERNGAQWWIESGM
GVPRVMPRSIEIDGVTGVIEGAMVNVGNPHYVIFVDNDEFRSHGMSWQELGAKISVDPLF
KFGTNVEFVRVHKANEIAFRIYERGCGPTTSSGTGTCASSAASMVLKNVARELTAVAQGG
SQYVTWPANDAEMMLTGPAEIVCTGEAEFGE
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgggcagtgtgaagtttgtgaaggcgcatgcatgtggcaacgattttctggtgatcgag
gagacggtggcgcgaggtcgccacgcggcgatggcgcgcaagctctgcgcgcgcaacacc
ggcatcggcgcagacggcatcgagttcctcgaccgtcgcgcagacggtagcctgtttctg
cgcctgttcaacgccgatggcagcgaggcggagttgagtggcaacggcacacgctgcgtc
gccgcatggctggctgcgagcgaaggccgcgagagcgtcaccctgggcacgcacggcggt
ttgcgcacttgccgggtggtggagcgcaacggcgcccagtggtggattgagagcggcatg
ggtgtgccgcgcgtgatgccgcgcagcatcgagatcgacggcgttaccggcgtgattgaa
ggcgcgatggtcaacgtcggcaacccgcactacgtcatcttcgtcgataacgatgagttc
agaagccacggaatgagctggcaggaactcggcgcaaagatcagcgtcgacccgcttttc
aagttcggcaccaatgtcgagtttgtgcgggtgcacaaagccaatgagattgcattccgc
atctacgagcgcggctgcgggccgaccacttcgagcggcactggcacctgcgcttcgagc
gcggcgtcgatggtgctgaagaacgtcgcacgcgagctgacagcggttgcgcagggcggc
tcgcagtatgtgacctggcccgcgaacgacgcggagatgatgctcaccggaccggcagag
attgtctgcacaggtgaagcggagtttggggagtag
DBGET
integrated database retrieval system