Granulicella sp. 5B5: GOB94_02595
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Entry
GOB94_02595 CDS
T08433
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
grb
Granulicella sp. 5B5
Pathway
grb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GOB94_02595 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grb03400
]
GOB94_02595 (uvrB)
DNA repair and recombination proteins [BR:
grb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GOB94_02595 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GOB94_02595 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
Kinesin
AAA_22
Microtub_bd
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QMV17709
LinkDB
All DBs
Position
597704..599698
Genome browser
AA seq
664 aa
AA seq
DB search
MDFQLVSDYSPQGDQPRAIRELTNGLAAEEKDQVLLGVTGSGKTFTMAKIIEQSQRPALI
LAHNKTLAAQLYHEFKQFFPNNAVEYFVSYYDYYQPEAYIPAGDLYIEKESTINDELDKL
RLSATRSLFERRDCIIVSSVSCIYGLGSPEAYYGMLLLLEKGQKLKREDITRRLVEILYE
RNDVDFRRGTFRVRGDIIEVFPTYDENAFRIELFGDEIDSLSQIDPLFGTVKQKYSRLPI
YPKSHYVVQPERKTTAINSILDELIDWEAQLEKEGRLVESQRIHQRTRFDLEMIKSVGFC
HGIENYSRHFSGRLPGEPPPTLLDYFPRDFLTFIDESHVTVPQLHGMWHGDRSRKQNLVD
YGFRLPSAMDNRPLRFEEWESRVGQIIYVSATPGPYELTKSAGVVVEQIIRPTGLVDPQV
EIRPVKGQIDDLLAEIRDRAEKHQRVLVTTLTKRMAEDLANYYTEVGVRCRYMHSEIDTL
ERIRLLRSLRKGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSQGSLIQTIGRAA
RHLEGRAILYADKMTDSMQRAIGETNRRRNAQEAYNAEHGITPRTVIRSIDDSLATITNA
DYLELTNDDVALEALEFTTQADLDTYIQNLESDMRESAKKFEFEKAAKLRDQIKDLRDKE
FLFS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggacttccagctagtctccgactactccccccagggcgaccagccccgcgccatccgt
gagctgacgaacggtctcgccgccgaagagaaggaccaggtcctgctcggcgtcaccggc
tccggcaagaccttcaccatggccaaaatcatcgagcagtcgcagcgccccgcgctcatc
ctcgcgcacaacaagactctcgccgcgcagctctatcacgagttcaaacagttcttcccc
aacaacgccgtcgagtacttcgtctcctactacgactactaccagcccgaagcctacatc
cccgccggcgacctctacatcgaaaaagagtccaccatcaacgacgagctcgacaagctc
cgcctcagcgccacgcgctccctcttcgagcgccgcgactgcatcatagtcagctccgtc
tcctgcatctacggcctcggcagccccgaagcctactacggcatgttgctgctcctcgaa
aaaggccagaagctcaagcgcgaagacatcacccgccgtctcgtcgaaatcctctacgag
cgcaacgacgtcgacttccgccgcggcaccttccgcgtgagaggagatatcatcgaggtc
ttccccacctacgacgagaacgccttccgcatcgagctcttcggcgacgagatagactcc
ctctcgcagatcgacccgctcttcggcaccgtcaagcagaagtactcgcgcctccccatc
tatccgaaatcgcactacgtcgttcagcccgagcgcaagaccaccgccatcaactccatc
ctcgacgagctcatcgactgggaggcccagctagaaaaagagggccgcctcgtcgagtcg
caacgcatccaccagcgcacccgcttcgacctcgagatgatcaagtccgtcggcttctgc
cacggcatcgaaaactactcgcgccacttctccggccgcctccccggcgagcccccaccc
acgcttctcgactacttcccccgcgacttcctcaccttcatcgacgagtcccacgtcacc
gtcccgcagctccacggcatgtggcacggcgaccgcagccgcaagcaaaacctcgtcgac
tacggcttccgcctcccctccgccatggacaaccgccccctccgcttcgaagagtgggag
tcccgcgtcggccagatcatctacgtctccgccacccccggcccctacgagctcaccaag
tccgccggagtcgtcgtagaacaaatcatccgccccaccggcctcgtcgacccgcaagtc
gaaatccgccccgtcaaaggccagatcgacgacctcttagccgagatccgcgaccgggct
gagaaacatcagcgcgtcctcgtcaccacgctcaccaagcgcatggccgaagacctcgcc
aactactacaccgaggtcggcgtccgctgccgctacatgcactccgagatcgacaccctc
gaacgcatccgcctcctccgctccctccgcaaaggcgagtacgacgtcctcatcggcatc
aacctcctccgcgaaggcctggatttaccagaggtgtcgcttgttgcaattttggatgcc
gacaaagaaggcttcctccgcagccagggctccctcatccagaccatcggccgcgccgcc
cgccacctcgaaggccgcgccatcctctacgccgacaagatgaccgactccatgcagcgc
gccatcggagaaaccaaccgccgccgcaacgcgcaggaggcctacaacgccgaacacggc
atcaccccccgcaccgtcatccgcagcatcgacgactccctcgccaccattaccaacgcc
gactacctagaactcaccaacgacgacgtagccctcgaagccctggagttcaccacccag
gccgacctcgacacctacatccagaacctcgaatccgacatgcgcgaatccgccaaaaaa
ttcgagttcgaaaaagccgccaaactccgcgaccaaatcaaagacctcagagacaaggaa
ttcctgttcagttag
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