Granulicella sp. 5B5: GOB94_03170
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Entry
GOB94_03170 CDS
T08433
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
grb
Granulicella sp. 5B5
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
grb03032
]
GOB94_03170
03036 Chromosome and associated proteins [BR:
grb03036
]
GOB94_03170
03400 DNA repair and recombination proteins [BR:
grb03400
]
GOB94_03170
DNA replication proteins [BR:
grb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GOB94_03170
Chromosome and associated proteins [BR:
grb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GOB94_03170
DNA repair and recombination proteins [BR:
grb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GOB94_03170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QMV17808
UniProt:
A0A7D8BE60
LinkDB
All DBs
Position
718947..719216
Genome browser
AA seq
89 aa
AA seq
DB search
MIKQDLIQRVVERTGLPRIKAESAVDAIFEAMKGALTKSDRIELRGFGVFTVKPRKTGVG
RNPRTGAEVSITPGKAVRFKPGKDLHLID
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
ttgattaagcaggatctcattcaacgggtcgtcgaacgcacgggactccctcgcatcaag
gccgagtccgcggtagacgctatctttgaggccatgaagggcgctctgaccaagagcgac
cgcatcgaactgcgcggcttcggcgtcttcacagtcaaaccccgcaagaccggggtggga
cgcaacccgcgcaccggcgcggaggtcagcatcactccgggcaaggctgtgcgcttcaaa
cccggcaaggacctgcacctgatcgactga
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