Granulicella sp. 5B5: GOB94_03205
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Entry
GOB94_03205 CDS
T08433
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
grb
Granulicella sp. 5B5
Pathway
grb03030
DNA replication
grb03430
Mismatch repair
grb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOB94_03205 (holA)
03430 Mismatch repair
GOB94_03205 (holA)
03440 Homologous recombination
GOB94_03205 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
grb03032
]
GOB94_03205 (holA)
03400 DNA repair and recombination proteins [BR:
grb03400
]
GOB94_03205 (holA)
Enzymes [BR:
grb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GOB94_03205 (holA)
DNA replication proteins [BR:
grb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GOB94_03205 (holA)
DNA repair and recombination proteins [BR:
grb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GOB94_03205 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
AAA_chap_N
Motif
Other DBs
NCBI-ProteinID:
QMV17815
LinkDB
All DBs
Position
complement(728258..729400)
Genome browser
AA seq
380 aa
AA seq
DB search
MSTAQTSGLKSFAAAERFLAEVSGDARRPGYVLLGDEAFLYEICRKGVLAALVPDDMRDF
CLHDLDLASTSIFDALDLAQTPSLMAPFQVLFIRNLKLLYGRGQKKDEFAVLDAYFRSPN
PQALLIFVADHIALPQDLRRMDMTDKERVEKIRETLGDSCGIVELQRVSEDDAIKWVLRE
SKAKGVVFTDDAARELVDALSADMLTIASEMEKLLLYAGAMQRNTVELADVETMVSAAKQ
RSLYELTDAISQKDAPRALALLHGLLNASDGGEDAAIGHVFMLAKTYRQMLILNEKQVKD
SRAIWQVLWPGFRVAPFAADALIAQARRYRDRSDLTRGLRAIAKADLELRSSPPDKRLVL
ERLVMRLAGKATESELEAVS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggcgcagacttcgggattgaagagttttgccgccgccgagcgttttctcgcg
gaggtgagcggcgatgctcgacggcctggctacgttctgcttggcgacgaagcctttctc
tacgaaatctgccgcaaaggcgtgcttgcagctctggtgccggacgatatgcgcgacttc
tgcctgcatgacctcgacctcgccagcaccagcatcttcgatgcactcgacctcgcgcag
acgccttcgctgatggcaccgttccaggtgctcttcatccgcaacctcaagctgctctat
ggccgtggccagaagaaggatgaattcgccgtgctggatgcatactttcgcagccccaac
ccgcaggcgctgctcatcttcgtcgctgaccacattgcgctgccgcaggacctgcgccgc
atggacatgaccgacaaggagcgcgtcgagaagatccgcgagaccctcggcgatagctgc
ggcatcgtggagctgcaacgcgtcagcgaagacgacgccatcaagtgggtgctgcgcgag
tcgaaggcaaagggtgtcgtcttcacggacgacgctgcgcgcgagctcgtcgacgccctc
agcgcggacatgcttaccatcgccagcgagatggagaagctgctgctctatgcgggcgcg
atgcagcgcaacacggttgagcttgccgacgtcgagacgatggtctctgccgccaagcag
cgcagtctctacgagctcaccgatgccatcagtcagaaggacgccccgcgcgcgcttgcg
ctgttgcacggcctgctcaatgcctccgacggtggcgaagatgcggccatcggccacgtc
ttcatgctcgccaagacctaccggcagatgctcatcttgaatgagaagcaggtcaaggac
tcgcgcgccatttggcaggtgttgtggccgggcttccgcgttgcgccctttgcggccgat
gcactcatcgcgcaggcgcgccgctatcgtgaccgcagcgacctcacgcgcggcctccgc
gccatcgccaaggccgatctcgagctgcgttccagtccgccggacaagcgccttgtgctg
gagcggctggtaatgcggttggcgggtaaagccacggagtcggaactcgaagccgtttcg
tga
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