Granulicella sp. 5B5: GOB94_04525
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Entry
GOB94_04525 CDS
T08433
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
grb
Granulicella sp. 5B5
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grb03016
]
GOB94_04525
Enzymes [BR:
grb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GOB94_04525
Transfer RNA biogenesis [BR:
grb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GOB94_04525
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
Motif
Other DBs
NCBI-ProteinID:
QMV18034
UniProt:
A0A7D7XGK8
LinkDB
All DBs
Position
complement(1054266..1055918)
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AA seq
550 aa
AA seq
DB search
MSFRKHDDHGKHNRQHQTNEQHGEGGHPPFGSWHPDGTHHVPFDLAQAALDEMHTAGFKP
EFGDGVAEQMAAIEQRYASLAVPSGVEDLRPLGWSSIDNDTSRDLDQIEVADRVPGGIRL
RVAIGDVAAAVEQDSPIDKHAEVQTQTIYTAVKNFPMLPLELSTGLTSLNEAADRLAVMM
TFVVGAEGEIVEEGVSLAMVRNRAQLAYSRVGPWLEKTAAGVVDDDVMSLRSDSAREHDA
DASLGGGDGLPANWLAEQLKLQDEAVQLLHAARVKRGALEFHKAEADPVVVDGRVIDIGE
ATQNRAMNLIEDLMVAANGVMARTLRKGGRSGLQRVVVVPRRWDRIVALAHEHGTELPVN
PDSVALNNFLEEQRRTDSIHYPDLAVAVIKLMGPGQYMLMRPDDDPTGHFGLAARDYTHS
TAPNRRFPDLVTQRVLHAMTRNEPAPYSDEELGAIAQHCNDADKALRKIERDMQKRVAAV
AMADRVGQVFPGVVTGASDKGVYVRVIRPPFEGRVVQNEQGLDVGDKVNVKLIHTNPARA
FIDFAKVSGR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaggaagcatgacgaccacgggaaacacaatcggcaacatcagacgaacgaa
caacatggtgagggtggacacccaccgtttggcagctggcacccggatgggacgcatcat
gttccgtttgacctggcgcaggcggcgctggatgagatgcataccgcagggttcaagcct
gagtttggcgacggtgtcgccgagcagatggcggcgatcgagcagcgctatgcgtcgctg
gcggtgccgtcaggtgtagaggacctgagaccgctggggtggtcgtcgatcgacaatgat
acgtcgagagacttggaccagattgaggtggctgaccgtgtgccgggcggaattcgcctg
agggtcgcgattggcgatgtagccgccgcggtggagcaggacagcccgatcgacaaacac
gccgaggtgcagacgcagacgatctatacggcggtaaagaactttccgatgctgccgctg
gaactctcaaccgggttgacgagcctgaacgaggcagccgaccggctggcggtgatgatg
acgttcgttgtaggcgccgaaggggagattgtggaagagggcgtttcgctggcgatggtg
cggaaccgcgcgcagctggcgtactcgcgtgtgggaccgtggctggagaagacggccgcg
ggtgtagttgatgacgatgtgatgtcgttgcggagtgacagcgcgcgggagcatgatgcg
gatgcgagcctgggaggtggcgatggcctgccggcaaactggctggcagagcagttgaag
ctgcaggacgaggcggtgcagcttctgcatgcggcgcgggtgaagcgcggtgcgctggag
tttcataaggccgaggctgacccagtggtggtcgacggccgtgtgatcgacatcggtgaa
gctacgcagaaccgtgcgatgaacctgatcgaagacctgatggtggctgccaacggagtg
atggcgcggactctgcgcaaaggtgggcgcagcggattgcagcgcgtggtggtggtgccg
cggcgctgggaccgcattgtggcactggcgcatgagcatggcacggagctgccggtgaat
ccggactcggtggctttgaacaactttctggaagagcaacggcggacggactcaattcac
tatccggacctggcggttgcggtaatcaagctgatggggccagggcagtacatgctgatg
cggccggatgacgatccgactggacacttcggactggcggcacgagactacacgcactcg
accgcaccgaaccggcgatttcccgacctggtaacgcagcgtgtgctgcacgcgatgacg
cggaatgagcctgctccgtacagcgatgaagaacttggcgcgattgcgcagcattgcaac
gatgcagacaaggcgctgcggaagatcgagcgcgatatgcagaagcgcgtggcggctgta
gccatggctgaccgcgtgggccaggtgtttccgggtgtggttacgggcgcgagcgacaag
ggcgtgtatgtgcgcgtgatccggccgccgttcgaagggcgcgtggtgcagaacgagcag
gggctggatgtcggcgacaaggtgaacgtgaagctgatccacaccaatccggcgcgcgca
ttcatcgactttgcgaaggtgagcgggcgctga
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