Granulicella sp. 5B5: GOB94_08385
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Entry
GOB94_08385 CDS
T08433
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
grb
Granulicella sp. 5B5
Pathway
grb03420
Nucleotide excision repair
grb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GOB94_08385
03430 Mismatch repair
GOB94_08385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grb03400
]
GOB94_08385
Enzymes [BR:
grb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GOB94_08385
DNA repair and recombination proteins [BR:
grb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GOB94_08385
MMR (mismatch excision repair)
Other MMR factors
GOB94_08385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_14
ResIII
Motif
Other DBs
NCBI-ProteinID:
QMV20310
LinkDB
All DBs
Position
complement(2005479..2008265)
Genome browser
AA seq
928 aa
AA seq
DB search
MNPQQREGIVSVDGPVLLLAGAGSGKTRVITHRIAYLIEERGVSPDNILAVTFTNKAAKE
MGERVEKILGHSTLAQPTIATFHSFCVRVLRRDIEALRVGNVGLTRSFAIYDETDQQAVV
KAALKRLGIDDKQLKPRVALGRISWAKNHMIDPQEYFLASTNPLEEKIAHIFEIYKKELA
KANALDFDDLLLETVRLLKSSAEVRERYNRKYKYLLIDEYQDTNRPQYELMKLLGKHGNV
CVVGDEDQSIYSWRGADIKNILEFEKDFPNAKTIRLEQNYRSTQVILEGASAVVAQNVQR
KGKNLWTSREGGSLIGYYEAPDGENEALFIADRIAQYIREAGSSEDLPRCAVLYRTNSQS
RLVEEALRRYQIQYHMVGGFSFYDRAEVKDMLSYLKLVQNPHDSIALGRVVNSPPRGIGK
TTMETLERIALTTGLSTWEAIGRAMEEKLLPARTLAALEKFKRLIEDARAMLGPAFAESL
AASTVPDNVVAFLAPAEEEPGYIESLAASADTEAENTTFDFGFATDDEPTPAMTGSDDGA
NTSFDTSFNFGFDFGPSEEISTLAPENAAAGTASLNPFAPVPLKRSASDEIRDRLKRIAA
EEVRSETSERPAFRKPGDAATLPELIKFLNDRSGYIRALEDEATPESFSRIENLKELANA
AQDATSRGETLAEFLDHAALVSDADQYSAEARVTLMTLHAAKGLEFPLVFLAGMEEGLFP
HSRTLQDPEQMEEERRLCYVGMTRAMDTLVMTRARYRRRYGSDMPESSIASRFLEEVPSR
LVEDLSPKGYGSAYSTPYPQRRGGGDDYGGERHYSYEDESQEPGGGGARSYASQRYGSKP
RSGSGPLDNTAAFFGKGSSGFKGRPKLDVASPTGKTGLGKGIRVRHPKYGEGIIFAREGE
GEDAKITVQFSGHGMKKLVEKFAQLERL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcaacagcgcgagggcatcgtctcggtcgatgggcccgtgctgttgctcgct
ggtgcaggcagcggtaaaacccgcgtcatcacgcaccgcatcgcgtacctgattgaggag
cgcggcgtctcgcccgacaacatcctcgccgttaccttcacgaataaggctgctaaagag
atgggtgagcgcgtggagaagatcctcggccactccacgcttgcgcagcccaccatcgcc
accttccacagcttctgcgtgcgcgtgctgcgccgcgacatcgaagccctgcgtgtcggc
aacgtaggtctcacgcgcagcttcgccatttacgacgagaccgatcagcaggccgtcgtc
aaagccgcgctcaagcgccttggcatcgacgacaagcagctcaaaccccgcgtcgctctt
ggccgcatcagctgggccaagaaccacatgatcgacccgcaggagtacttcctcgcctcc
acgaacccgctggaggagaagatcgcgcacatcttcgagatctacaaaaaggagctcgcc
aaggccaacgcgctcgacttcgacgacctgctgctcgaaactgtgcgtctgctcaagagc
tccgccgaagtgcgtgagcgctacaaccgcaagtacaagtacctcctcatcgacgagtac
caggacaccaaccgcccgcagtatgagctgatgaagctgctcggcaagcacggcaacgtc
tgcgtcgtcggcgatgaagaccagtccatctacagctggcgcggcgcggacatcaagaac
atccttgagttcgaaaaagactttcccaacgcgaagaccattcgcctcgaacagaactac
cgctccacgcaggtcatcctcgaaggcgccagcgcggtcgtcgcgcagaacgtgcagcgc
aagggcaagaacctctggacctcgcgtgagggcggctcgctcatcggctactacgaggcc
cccgatggcgagaatgaagcactctttattgcggataggatcgcgcagtacattcgcgaa
gccggctccagtgaggacctgccgcgctgcgccgtgctctatcgcaccaactcgcagtcg
cggctggtggaagaggcgctgcggcgttatcagatccagtaccacatggtcggcggcttc
agcttctacgaccgcgccgaggtgaaggacatgctcagctacctcaagctggtgcaaaat
ccgcacgactccatcgcgttgggacgcgtggtgaactcaccgccgcgcggcatcggcaaa
accacgatggagacgctcgagcgcatcgccctcaccaccggcctcagcacgtgggaggcg
atcggccgcgcgatggaggaaaagctgctgcccgcgcgcacgctcgcagcgcttgaaaaa
ttcaagcggctcatcgaagacgcgcgtgccatgctcggcccagcgttcgctgagtcgctc
gccgcgagcacagtcccggacaacgtcgtggccttcctcgcgcctgctgaggaagagccc
ggatacatcgagtcgctcgccgcttcagccgacaccgaggccgagaacaccacgttcgac
ttcggcttcgccaccgacgacgagcccacgcctgccatgaccggcagcgacgatggtgcc
aacacaagcttcgataccagcttcaacttcggcttcgacttcggccccagtgaagagatc
agcaccctcgcgccggagaacgcggcagcaggcaccgcgagcctcaaccccttcgctccc
gtgccgctcaagcgctctgccagtgacgagatccgcgaccgcttgaagcgcatcgcagca
gaagaggtgcgcagcgaaaccagcgagcgccccgccttccgcaagcccggtgatgccgcc
acgctgcccgagctgatcaagttcctcaacgaccgctccggctacatccgtgcgcttgag
gacgaagccacacccgagtccttctcgcgcatcgagaacctgaaggaactcgccaacgcc
gcgcaggatgcgacgtctcgcggggagacattggcagagtttttagaccatgccgcgctc
gtctccgacgccgaccagtactcggcggaagcgcgcgtcacgctcatgacgctgcacgcg
gccaagggcctcgaatttccgctcgtcttcctcgccggtatggaagaaggcctcttcccg
cactcgcgcacgctgcaggacccggaacagatggaggaggagcgccgcctctgctacgtc
ggcatgacgcgtgcgatggacacgctggtgatgacccgcgcgcgctatcgccgccgctac
ggcagcgacatgccggagtcctccatcgcttcgcggtttctggaagaggtgccgtcgcgg
ctggtcgaggacctttcgccgaagggctatgggagcgcctactctacgccgtacccgcag
cggcgcggcggcggggatgactatggtggggaacgccactactcgtatgaagacgagagc
caggagccgggcggtggtggcgcccgcagctacgcctcgcagcgttatggcagcaagcct
cgcagcggcagcggcccgctcgacaacaccgcagccttcttcggcaagggcagttcaggc
ttcaaaggccgcccaaagctggatgtcgcctcgcccaccggcaagaccggcctgggcaag
ggcatccgcgtccgccaccccaaatatggcgaaggcatcatcttcgcccgcgaaggcgaa
ggtgaagatgccaagattacagtacaatttagtggtcacggcatgaagaagctggtcgaa
aagttcgcccagctggaacgactgtag
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