Gracilibacillus salitolerans: GI584_03170
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Entry
GI584_03170 CDS
T06279
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
grc
Gracilibacillus salitolerans
Pathway
grc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GI584_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grc03019
]
GI584_03170
03009 Ribosome biogenesis [BR:
grc03009
]
GI584_03170
Enzymes [BR:
grc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GI584_03170
Messenger RNA biogenesis [BR:
grc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GI584_03170
Ribosome biogenesis [BR:
grc03009
]
Prokaryotic type
rRNA helicases
GI584_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
QGH33112
UniProt:
A0A5Q2TG43
LinkDB
All DBs
Position
633753..635201
Genome browser
AA seq
482 aa
AA seq
DB search
MTNFNELGISASIMKALEKMGFEEATPIQAQTIPLGMGGKDVIGQAQTGTGKTAAFGIPM
IEKIDPNERKIQGLIVAPTRELAIQVSEEMHKLAKFKGVRTLPVYGGQHMERQIKALKDR
PHIVVATPGRLLDHLRRRTIRVDQVHTAVLDEADEMLNMGFIDDIRDILKAIPEERQTLL
FSATMPKEIRDIAATLMKQPEEVKVKSKEMTVSNIDQYFVEVHEKQKFDTLTNLLDIHVP
ELAIIFGRTKKRVDELTEGLQARGFRAEGIHGDLTQGKRTSVLKKFKFGRIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKMGEAISFITPREVPHLHLIEKVTK
SKMKRMTAPSYDEAKRGQQQLTVQKLIRTIEKKELQDYRETASEILDEYDSATVVAAALK
MLTRERRQTPVTLTSVQPVSVKKGSNNKGNNKKFRNDKRGFGRKGKQGGRNRKFQNKRTN
KR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaattttaatgaattaggtatttcagcgtcaattatgaaagcattagagaaaatg
ggatttgaagaagcaacgccaattcaagctcaaacgattccgttaggcatgggaggcaaa
gatgtcatcggccaggcacaaacaggtactggtaaaacggcagcttttggtattccgatg
atcgaaaaaattgaccctaacgaacgtaaaattcaagggttgattgttgcacctacaaga
gaattagcaatacaggtgtcagaagaaatgcataaattagcgaaattcaaaggtgttcgt
acattgcctgtctatggtgggcagcatatggaacgccaaattaaagcgttaaaggatcgc
ccgcatattgtagtagcaaccccaggacggttgttagatcatttacgtcgtcgtaccatt
cgtgtcgatcaagtacacactgctgtattggatgaagcagatgaaatgttgaatatgggc
tttatcgatgatatccgtgatatcttaaaagcaattccagaagagagacaaaccttactg
ttctctgcaaccatgccaaaagagattcgtgatattgcggcaacattgatgaaacaacca
gaagaggtaaaagtaaaatcaaaagaaatgacggtttcgaatattgatcaatacttcgtg
gaagtacatgagaaacaaaaattcgatacactgacaaacttactagacatccatgtgcct
gaattagcgataatttttggacgtacgaaaaaacgtgttgatgagctgacagaaggcttg
caagctcgcggttttcgtgcggaaggaatccatggtgacttaacacaaggtaagcgtact
tctgtgttgaaaaaattcaagtttggtcgtattgaaattttggtagcaacagacgtagct
gcacgtggattagatatttcaggtgtaactcatgtatacaattttgatattccacaggac
ccggaaagctatgtacaccgtattggacgtacaggtcgtgccggaaagatgggcgaggct
atttcttttattacaccaagagaagttcctcacttgcatttaattgaaaaagttacgaaa
agcaaaatgaagcgtatgacagcacctagttatgatgaagcaaaacgtggacaacaacaa
ttaactgtacagaaattaatcagaacgattgagaaaaaggaacttcaggattaccgagag
acagctagcgaaattctagacgaatacgattccgcaacagttgtcgcagcagcattaaaa
atgctaactagagaaagaagacaaacaccagttaccttaacatctgttcaaccagtaagt
gttaaaaaaggatcgaacaataaaggtaacaacaaaaaattcagaaacgataaacgtggg
tttggtcgcaaaggaaaacaaggtggccgcaaccgcaaattccaaaacaaacgtactaat
aaaaggtaa
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