Gracilibacillus salitolerans: GI584_11405
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Entry
GI584_11405 CDS
T06279
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
grc
Gracilibacillus salitolerans
Pathway
grc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GI584_11405 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grc03019
]
GI584_11405 (rny)
Messenger RNA biogenesis [BR:
grc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GI584_11405 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF3139
DUF2844
PetM
Exonuc_VII_L
NEDD4_Bsd2
PFF1_TM
Motif
Other DBs
NCBI-ProteinID:
QGH34601
UniProt:
A0A5Q2TKG5
LinkDB
All DBs
Position
2437928..2439487
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AA seq
519 aa
AA seq
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MDTVAIIISILLTFVGIVVGYLIRKTIAEKKISSAEELAKQIVEEGYKNAEVAKKEALLE
AKDENHKIRQQADEELRERRAEIQKLESRLMQKEENLNRKDQTLDKRELLLEKKEGSLTE
KQQQIEEMESKVGAMLSEQQAELERISGYTTDQAKQIILQRVEEEVTHESAMIIKEAENR
AKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARIALEKLVQDGRIHPARIEEMVDKSRREVDEYIRD
YGEQTTFEIGVHGLHPDLVKILGRLKYRTSYGQNVLKHSTEVAYLSGLLAAELGEDQTLA
RRAGLLHDIGKAIDHEVEGSHVEIGKELGTKYKENDVVINAIASHHGDEEATSVIAVIVA
AADALSAARPGARSETLENYIKRLEKLEEISESYAGVEKSFAIQAGREIRIIVKPDEIDD
AESTKIARDIRKRIEDELDYPGHIKVTVIRETRSVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatactgtagcgatcatcatctccattttgcttacatttgtcggtattgttgttggt
tatctgattagaaagacaattgcagagaagaaaatttcgagtgcagaagaattagcaaaa
caaattgtggaagagggctataaaaacgctgaagttgcgaagaaagaagcattactagaa
gcgaaggacgaaaatcataaaattcgtcaacaagcggatgaagagcttagagaacgtcga
gccgaaattcaaaagcttgaaagtcgtctcatgcaaaaggaagaaaacctcaatcgtaag
gatcaaactttagacaagcgtgagctattgttagaaaagaaagaaggttcgcttacagaa
aaacaacaacaaattgaagaaatggaaagcaaagttggagcaatgttaagcgagcaacaa
gcagaattagaacggatatcaggatataccacggatcaagcaaaacaaattattttgcaa
cgtgtggaagaagaagttacacatgaatcagccatgattattaaagaagcagaaaatcgt
gcaaaagaagaagcggacaaaaaagctaaaaacatcttgtcgctggcattacaacgatgt
gctgctgatcacgtggctgaaaccactgtttccgttgtcaatcttccgaatgatgagatg
aaaggtcgaataattggtcgtgaaggtcgaaatattcgaactttagaaacactgacaggt
attgatctaataattgatgatacaccagaagcagtaatcttatctggttttgatccaata
cgtcgtgagattgctcgaattgcattagaaaaactagtgcaagatgggcgtattcaccct
gctagaattgaagaaatggtggataaatcaagacgtgaagtcgatgaatatattcgtgat
tatggagaacagacaacatttgaaataggagttcatggtcttcatcctgatttagtgaag
atattaggacgattgaaatatcgaacaagctatggacaaaatgttttaaaacactcaacg
gaagtagcttatttatccggtctattagctgctgagctcggagaagatcaaacacttgct
agacgtgccggtttattacatgacattgggaaagcaattgatcatgaggtggaaggtagc
cacgtagaaatcggtaaagagctagggacgaaatacaaagaaaatgatgtcgttattaat
gcaattgcttcacaccacggagacgaagaagcaacgtctgtcattgcagtaatcgttgct
gcagcagatgcactttcagctgctcgtccaggtgcaagaagtgagacattagagaattac
attaaacgtttagaaaaattggaagaaatctcagaatcatatgcaggtgttgaaaaatca
tttgcaattcaggcaggtagagagatacgtatcatagtgaaaccagatgaaattgatgat
gcagaatctactaagatcgcaagagatattcgaaaacgaattgaagatgagttggattat
ccggggcatataaaagtaaccgtaatccgagaaactcgctcagtagaatacgcaaaatag
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