Gracilibacillus salitolerans: GI584_13320
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Entry
GI584_13320 CDS
T06279
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
grc
Gracilibacillus salitolerans
Pathway
grc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
grc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GI584_13320 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grc03021
]
GI584_13320 (rpoD)
Transcription machinery [BR:
grc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GI584_13320 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
Pox_G7
Motif
Other DBs
NCBI-ProteinID:
QGH34957
UniProt:
A0A5Q2TLJ4
LinkDB
All DBs
Position
complement(2797130..2798245)
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AA seq
371 aa
AA seq
DB search
MAENKPSRSKEAELTIEQAKDQLLELGKKRGVLAYEEVAERLSNFDLESDQMDEFYEFLN
EQGVEVIGDSDEDPTMQQLSKEEEFDLNDLSVPLGIKINDPVRMYLKEIGRVDLLSASEE
IDLAKKIEEGDEYAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDF
RKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPE
EIAKDMDLTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYELLK
EQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHP
SRSKRLKDFLE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacaagccatcacgttcaaaagaagctgaattaactattgagcaggccaaa
gaccaattattggaattaggtaaaaaacgtggtgttttagcatatgaggaagtagcagaa
agattatcaaattttgacttagaatccgatcaaatggatgaattctatgagttcctaaat
gaacaaggtgtagaagtaataggagattcagatgaagatcctaccatgcagcagctatca
aaagaggaagaatttgacctaaatgatttaagtgttccgttaggcattaaaataaatgac
ccagtccgtatgtatttaaaggaaattggccgagtcgatttattatctgcttcggaagaa
attgaccttgcaaagaaaattgaagaaggtgacgaatacgccaaaaaaagattagctgaa
gcgaaccttcgtcttgttgtaagcatagcgaaacgttatgttggacgtggtatgttattt
ctagatcttattcaagaaggaaatatggggctaattaaagcggtagaaaaattcgatttc
cgtaaaggatttaagtttagtacctatgcaacttggtggattcgacaagcgattacaaga
gccatcgcagatcaggcgagaacgattagaattcctgttcatatggtagaaacaattaat
aaactgattcgtgtccaacgtcaattattacaagatctaggcagagaaccaactccagaa
gaaattgccaaggatatggatttaacacctgacaaggtaagagaaattttaaaaatcgct
caagaacccgtatcattggaaacaccaattggtgaagaagatgactcacatctaggtgac
tttattgaagaccaagaagctacatctccatctgatcatgcggcatatgaattattaaaa
gaacaattagaagatgttttagacacactaactgatcgtgaagaaaacgtattacgatta
cgtttcggtttagatgatggaagaacgagaacattagaggaagtcggtaaggtatttggc
gtaactcgcgaaagaattcgccaaattgaagcgaaagcattacgaaaattacgtcatcca
agtcgcagcaaacgattaaaagacttcttagaataa
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