Gracilibacillus salitolerans: GI584_15145
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Entry
GI584_15145 CDS
T06279
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
grc
Gracilibacillus salitolerans
Pathway
grc03030
DNA replication
grc03430
Mismatch repair
grc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
grc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GI584_15145 (dnaE)
03430 Mismatch repair
GI584_15145 (dnaE)
03440 Homologous recombination
GI584_15145 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
grc03032
]
GI584_15145 (dnaE)
03400 DNA repair and recombination proteins [BR:
grc03400
]
GI584_15145 (dnaE)
Enzymes [BR:
grc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GI584_15145 (dnaE)
DNA replication proteins [BR:
grc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GI584_15145 (dnaE)
DNA repair and recombination proteins [BR:
grc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GI584_15145 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
DUF655
tRNA_anti_2
Het-6_barrel
Motif
Other DBs
NCBI-ProteinID:
QGH35304
UniProt:
A0A5Q2TK43
LinkDB
All DBs
Position
complement(3137696..3140983)
Genome browser
AA seq
1095 aa
AA seq
DB search
MSHSSALQIKSGYSLMNSTVQIAPLVNQAKSYGYQHLALTDEGVMHGAIPFYQACKKAGI
NPIIGLSYQVEINERLVEVIALAKNVIGYQHLLQLSTAMQHGKKVTVEMLKNYDESLFTI
LPADQWQVEQIETNLQQIRTDYHLENIYLGVSENMTNYRDMLEQLDIKIVAMSDVKYLNK
LEVAAYSCLRAIDQGVKWNQKMLEEIEGTYLRTPDELEIAFQKWPELLTEANQLAEQCYI
ELPLEQRLLPKYPVPSGIHADQFLEELCKKSLPDKYPQVTEEIAERLHYEIDVIQSMGFS
DYFLIVWDFVHYAKENQIMVGPGRGSAAGSLVAYLLGITDVDPIKYDLLFERFLNPDRVT
MPDIDIDFSDEKRDQVIRYVVDKYGTDHVAQIITFGTFATRSLLRELFKVLDIHDNDQAY
ILKSLPKDSNSTIAAMLKQTPELTEYVKQSEQLKRLFKIANQLEGLPRHVSTHAAGVIIS
DQEMTRHVATIPSQNNVALTQYPMNDLEKIGLLKIDFLGLRNLTLIEKILKQIEYHDKYS
ISLRNIPFDDENTYKLLQKGETNGIFQLESQGMQKVLRELRPTNFEDIVAVNALYRPGPM
EFIPTYIERKNKTKEIPHLHPDLASILEKTYGVLVYQEQIMQIVHEMAGFTYGEADILRR
AVSKKDKTLLIDNKQKFINGSLENGYNSRTAEEVFDWIVRFSNYGFNRSHAVAYSVIAYQ
LAYLKANYPVAFFIEMLSMHMGNSEKIQIYLREAKSRNIAILPPSINQSIGKFKAEKGSI
RIGLNIIKGIGFQAVQTILDARKNQRFKNLFDFCLRVPLQKINRSIIESLILAGAFDELH
DNRATLLASLDEAMEQGELFREFDDQIHFFEGDLALDVSYTETDPYPIMKQLMMEKEVVG
FFVSTHPLAQVRDKIRKYGYVSIQQAQYLKQKKIKMAAVVQSLKIIRTKKGETMAFATIS
DESDEIDTVLFPKIFRQVNHWLEEDSFVFVEGKLEERNEKKQLLVNDIQPYQLEEKQLTT
DSVYIKVADENEELLEKLEELATKYPGSSTVFLYQEKQRQLFKLASNYNLDSAWNVIKEL
KQYFGEDNVVIRHST
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattcttctgcactgcaaatcaaaagtggctactcattaatgaatagcacggtt
caaatagcaccattggtaaatcaggcgaaaagctatggctatcagcaccttgcgttgacg
gatgaaggggtcatgcatggagcgatccctttttatcaagcatgtaagaaggcaggaata
aatccgatcatcggactttcttatcaagtcgaaattaatgaacgtttggttgaagtcatc
gctttagcgaaaaatgtaataggttatcagcatttgttgcagttaagtacagcaatgcag
catggtaaaaaagtaaccgttgaaatgctgaagaactacgatgaatctctttttactatt
ttgcctgctgaccaatggcaggtagaacaaatagagacgaatctacaacaaatcagaacg
gattatcatttagaaaatatttatcttggtgtatcagaaaatatgaccaattaccgggac
atgctggaacaattggatatcaaaatagtggcaatgtcagatgtaaaatacttaaacaaa
ttagaagtggctgcttatagttgtttgcgtgcgattgatcaaggtgtaaaatggaaccag
aaaatgcttgaggaaatagaaggtacatatttaagaacgccagacgaacttgaaatagcg
ttccagaaatggcctgagttactgacagaagctaatcaactagcagaacaatgttacatt
gagctccccttagaacaaaggttattacccaaatatccggtcccgagtggtatccatgcc
gaccagtttttagaggaattatgtaaaaaaagtttacctgataaatatccacaagtgacc
gaagaaattgcagaacgtctccattatgaaattgacgtaatacaatcaatgggattcagt
gattattttctgattgtttgggactttgttcattatgcgaaagaaaatcaaattatggtg
ggaccaggtcgtggatctgcagctggttcacttgtagcatatcttttagggattacagat
gtagacccaattaaatatgatttgttatttgaacgatttttaaacccggatcgtgttacc
atgcctgatatcgatattgacttttcagacgagaagagagatcaggtgattcgttatgtt
gtagataaatatggtacagatcatgtggcacaaatcatcacttttggtacatttgcgacg
cgctctttattacgggagctttttaaagtattggacattcatgataatgatcaggcttat
attttaaaatcattgcccaaagatagtaacagtaccattgcggcaatgttaaagcaaaca
ccagaattgacagagtatgtcaaacaatcggaacaattgaaaagactatttaaaatcgcc
aaccaactagaagggctaccacgacatgtttcgacacacgcggctggtgttattatcagt
gatcaagagatgacacgtcatgtagcaaccattccatctcaaaataatgtcgcattaacc
caatatcctatgaacgatttggagaaaatcggtttattaaaaatcgattttcttggatta
cgtaacttgaccttaattgaaaagattttaaaacaaattgaatatcatgataagtattct
atttccttgagaaacataccttttgatgatgaaaatacctataaactattacaaaaaggt
gaaacaaacggtatttttcaactcgagtcacagggaatgcaaaaagttttacgagaatta
cgtcccacaaattttgaagatattgtagcagtaaatgctttgtaccgaccaggtcccatg
gagtttattccaacctatatcgaacgtaaaaataagacgaaggagatccctcatcttcat
cctgatttagcctccatattggaaaaaacatatggtgtgctcgtctatcaagaacaaatt
atgcaaattgttcatgaaatggctggttttacatatggtgaagcagatattctcagaagg
gcagtaagtaagaaagataaaacacttttaatagataataaacaaaaatttatcaatgga
agtctggaaaatgggtataatagcagaactgctgaagaagttttcgattggattgttcgt
ttctctaattatggatttaacagaagtcatgctgttgcctatagtgtcattgcctaccaa
ttagcctacttaaaagctaattacccggtggcattctttattgaaatgttaagcatgcat
atgggaaactccgaaaaaatacagatttatttgcgagaagctaaaagcagaaacattgcg
attttaccaccatccattaatcagagtattggtaaattcaaagctgaaaaaggcagtatc
agaattggtttaaacattataaaaggtataggatttcaagctgtacaaacgatattagat
gcacgaaagaatcaacgttttaaaaatttatttgatttttgtctacgggtaccactgcaa
aaaatcaaccggtcgattattgaatcgctgattttagctggtgcattcgatgaactgcat
gacaatcgtgctaccctattagcaagtcttgatgaagcaatggagcaaggagagttattt
agagagtttgatgaccagattcatttctttgagggtgatttggcattagatgtttcttat
accgagacagacccatatccgattatgaagcaactgatgatggagaaagaagtggtagga
ttctttgtatccactcatccactagcccaggtacgtgataaaatacgcaagtatggatat
gtttcgatccagcaagcacagtacttaaaacagaaaaagataaaaatggctgcggtggtt
caatctctaaaaatcattcgaactaaaaaaggagaaacaatggcttttgcaacgatctcg
gatgaatcagatgaaatcgacacggtattatttccaaaaatattccgacaagttaatcat
tggctcgaagaagacagttttgtgtttgtagaaggaaaattagaagaacgaaatgaaaaa
aaacaactgcttgttaatgatatccaaccatatcaattggaagagaagcaattaacaaca
gacagtgtttatatcaaagtagctgatgaaaatgaggagctattagagaaattggaagaa
ttggcaacgaaatatccaggctcctctactgtctttctttatcaagaaaagcagcgacaa
ttatttaaattagcgagcaactataatctagatagtgcatggaatgtcatcaaagaatta
aaacaatactttggagaggacaatgtagtgattaggcattctacatag
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