Garra rufa (doctor fish): 141283086
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Entry
141283086 CDS
T11039
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
141283086 (gpcpd1)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
141283086 (gpcpd1)
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
Motif
Other DBs
NCBI-GeneID:
141283086
NCBI-ProteinID:
XP_073672463
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All DBs
Position
13:complement(42844825..42863058)
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AA seq
667 aa
AA seq
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MDSTKVTLTVRGTTSLGEVIAVVGSCETLGSWCHQKAVTLQQAQEDGALWRTTVQVPRGA
ETKYRYFKAFTLESKNAGGPCQVIVNRWETHQMPRSLSPSEPELVIDDGHFGAHTDGVEC
VDSGWLTCQTEIRLRLHYSVKPPVSITKKEFKKSRFRLKLMLEGIEEEEDEEESPSSWNK
MPTTLETSMISESGYKSRHSQPECGYALEPSKWTEYSIHTMDPDNLELTFEFFEEDLSEP
VVQGDAHPGHVGTACLLSSSFVESGKDQGVVTLPIMSRNARQTLGKVRVDYLVTRPIPGF
QCDMSQSFTKYWKKRSPLDVGHRGAGSTHAPKHHKIRENTIASFLSAANHGAAYVEFDVH
LSKDLVPIVYHDLTCCISTKKKNDKNSMVLVEVPVKDLTFDQLQLLKLAHRTAMEVHDHK
DLQDEEEYEYEHQPFPSLSQIFQAVPDSVGFNIELKWISQFKDGSWDAKLSTYFNMNQFL
DIILTCVLQNAGKRRIVFSCFDPDICTMVRQKQNKYPILFLTQGVTDIYPELMDIRCQST
KFAMSFAQSENILGISAHTDELLRNMEFIREAQSKGLVLFCWGDYNNDHDNRMKLRDQGI
DGLIYDRICEDKLEQSNIFKVEEQRGTLKEVIQTCACSTYRLPCSSFPCAGKSQETNGES
DSGQSSS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggacagcactaaagtcactctgactgtgagagggaccacatcactgggcgaggtgatc
gcagtggttggcagttgtgaaaccctggggagctggtgtcatcaaaaagccgtgacccta
cagcaagcacaggaggatggcgccctgtggagaacgaccgttcaggttccgcgaggggct
gaaaccaaatatcgctatttcaaagcattcactttggaatctaagaatgcaggtgggcca
tgccaagtcatagtcaatagatgggagacccatcagatgccacgctcattgagtccctca
gaacctgaactcgtgattgatgatggacattttggagcccatacagatggtgttgagtgt
gtggactcaggctggttgacgtgccagacagaaattcgtctcaggctacattactctgtg
aaacctccagtatctattactaagaaagaatttaagaagtcacgcttcagattgaagctg
atgctggaaggtattgaggaggaggaggatgaagaggaaagcccttcgtcatggaataag
atgcccactacactggagaccagtatgatcagtgagagtggatataagtctcgtcattcc
cagccagaatgtggctacgcccttgaaccgtccaagtggaccgaatacagcattcacacc
atggaccctgacaacctagagctcacctttgagttttttgaggaggacctgagtgagcct
gtggttcagggggatgcccatccaggccatgtcggcaccgcatgcctcttatcatcctct
tttgtggaaagtggcaaagatcagggtgtggtcactctaccgatcatgagccgaaatgct
agacagactctgggaaaagtccgagtggattacttggtgacgcgtcctatcccaggcttt
cagtgcgacatgagtcagtctttcaccaaatactggaagaaaaggagtcctttggatgtt
ggacacagaggagcaggaagcacacatgctcccaagcatcacaagatcagggaaaacaca
attgcctcatttctaagtgcggccaaccatggagcagcttatgtagagtttgatgttcat
ctgtctaaagatttagttccaatcgtgtaccacgatctcacctgctgtatttctactaaa
aagaaaaacgacaagaactcaatggtgttggtcgaagttcctgtcaaggatcttacattt
gatcaacttcagcttttaaaactcgcccacagaactgccatggaagttcatgaccacaaa
gacttgcaggatgaagaggagtatgagtatgaacaccagcctttcccttccctttcacag
atattccaggctgttccagatagtgtgggattcaacattgagttgaagtggatttctcag
ttcaaggatggctcctgggatgcgaaactctccacctacttcaacatgaatcagttcttg
gacatcatcctcacatgcgtgctgcagaatgccggcaagaggagaatagtcttctcatgt
tttgatcccgatatttgcacaatggtgaggcaaaaacagaacaaataccccatcctgttt
ctgacccaaggagtgacagacatctaccctgaactcatggacatccgctgtcagagcact
aagttcgccatgagctttgctcagagtgagaacatactgggaatcagtgctcacactgat
gagctcttgcgaaacatggagttcatcagagaggctcagtctaaagggctggtgctattc
tgctggggcgactataacaacgaccacgacaacagaatgaagttaagggatcaaggcatt
gatggcctcatttatgacagaatctgcgaggacaagctagagcagtcaaacatcttcaaa
gtagaggaacagagaggaactctaaaggaggttattcaaacatgtgcctgctccacctac
agacttccctgctcctcctttccctgtgcaggaaaatcccaggaaacaaacggggagtct
gattccggccagagttcctcatga
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