Garra rufa (doctor fish): 141283103
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Entry
141283103 CDS
T11039
Symbol
dsg2.1
Name
(RefSeq) desmoglein-2.1
KO
K07597
desmoglein 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04382
Cornified envelope formation
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141283103 (dsg2.1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141283103 (dsg2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141283103 (dsg2.1)
Cell adhesion molecules [BR:
grf04515
]
Cadherins
Major cadherins
141283103 (dsg2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
141283103
NCBI-ProteinID:
XP_073672481
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Position
13:9127560..9140409
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AA seq
1150 aa
AA seq
DB search
MARRISPAVAFLLCFGLSHVFEVEAKFEHSAALRRQKREWIVPPQVLEENVDYTKREFIA
KIRSDKEDVKMKNVRYSLKGIGADQEPYNLFVVNPENGFVRVTGILDRESIAQYNLSGVA
TFTDGTIAENDIGLRIKVKDQNDNPPVFGQMTAGAIDELSPQGTSVMKINCFDADEIGNP
NSQIKYEIVEQQPAGERMFTINREGTIVIANPNLDRETIDQYILLVKASDLNGAPGGNAA
TGTVTIKINDVNDNPPILQGPFEASIEENTEKVEVMRLKASDLDLKDTDNWVTKCFIASG
NEAGYFSIFTDTKTNEAIIMLDKAVDYEDVKDLKLGIGVINAAPFHPSVSGGQQGININF
GGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGSWSMTGSQIYNVNIKVKNQPEGPKFTPLT
KAIVISEGKTFSRTEVIARYPATDTDTGKEATNVKYVKGYDPDNWLTIDETTGAITMNKA
PDRESKYLVNGTYYAKIYSITQDLPSKTATGTVAIQVEDFNDHCPTVTTKLATLCTGKDA
ILVTAVDEDAAPNGAPFTFNVVPEGTKGKWTVEYLNDTTAIFRTSEKLWPGQYELMVDVK
DQQGLSCPKPHKIPVEVCTCSEQGACAREGGTSGISGGAGGLKRGSRLGPAGIGLLFLGL
LSLLLIPLLLLMCKCGATGMVGAFRDMPFDTKEHLISYHTEGQGEDRDVPVPVEPANIFV
DGGGGGGGGVRNFSSREVNSMRMIGAGGAGGAAYLDSSSTMGGRGYNEMEMSYMDSMRRS
EAFRGREMAGDFDGMALSDMFLAEYYSQKSRAMEDGFAKNEPKVYDYEGNGSPVGSVGCC
SILEDNNDLEFLNDLGPKFTTLADVCGGRKPEIPAPAPAPLPPAPRPIVNRTDVVSSSTN
VINSGNIVTSRVPTNPVNLASNTATSTRVENVVVTDSRPTVIANVQPAPTLLMQPQPMYY
MVEPQPSTVLLTERPAMGQNMYVLNSGPVTEGVVVQGGNIATNTLTRGERMVLVDRGAPA
QAGMLHTSNLSGSQLLLVDAGASSGQVLQGTLQRGVAGSQGLMVVEGQGGQLIQGSTQQG
VSTGGSQNFLYMESKGPSGVGQGGFQKGMTSTAGSFGSVGLGGGSVQINQNPSSHKIFHE
SKVMTTQNIK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcgtatttcgcccgctgttgcgtttctgctgtgtttcggattatcgcatgtc
tttgaggttgaagccaaattcgagcactctgcggccctccgcaggcagaagagagaatgg
atcgtccctccccaagtccttgaggagaatgtggattacaccaagagagaattcattgca
aaaattcgctcggataaggaagacgtcaaaatgaaaaatgtgaggtactcactgaagggt
attggtgcagaccaggagccgtataatttatttgttgtgaatcctgaaaatggatttgta
agggtaacggggatcctcgacagagagtccatcgcacaatacaacctttcaggcgttgct
acgttcacagatggaacgattgcagaaaatgacattgggctgagaataaaagtaaaggat
cagaatgataatccgcctgttttcggtcagatgactgctggggctatagatgagctcagt
ccacaaggtacatctgtgatgaagattaattgctttgatgctgatgaaattggaaaccca
aactctcaaatcaagtatgagattgttgagcagcaaccagccggggagagaatgttcaca
attaacagagaaggcacaatcgttattgccaatcctaacctggacagagagactattgat
cagtatatcctgcttgtcaaagcatctgacctgaatggagccccaggtggcaatgctgcc
acagggacagttaccatcaagatcaatgacgtcaacgataatccgcctatattgcaaggc
ccatttgaagctagtattgaggaaaatacagagaaagtagaggtgatgagactcaaagca
agcgacctggatcttaaagacacggacaactgggtgactaagtgctttattgcatcaggc
aatgaggctggatacttcagcattttcactgacacaaagaccaatgaggcaatcattatg
cttgacaaggctgttgattatgaggatgtcaaagatttgaaacttggcattggtgtaatt
aacgctgctccattccacccctctgtaagtggaggacaacaaggaataaatatcaacttt
ggaggcagcggcggcggtggcggtggaggtggcggcggcggaggcggtggcggaggtggt
ggcggcggtggcggcggcggcggtggaggtggttcatggtcaatgacaggcagtcagata
tacaatgtgaacataaaggtgaaaaaccagccagaaggacccaagttcacgcccctcaca
aaagccatcgtcatttcagaaggcaagacttttagcagaactgaggtcattgcaagatac
cccgccactgatacagacacaggaaaggaagctaccaacgtaaagtatgttaaaggatat
gacccagataactggctgaccatcgatgagacaactggggccatcacaatgaacaaggct
cctgaccgcgagtccaagtatctagttaacggcacctactacgccaagatttacagcata
actcaagacttgccttcaaagacggcaacaggcaccgttgccatccaggtggaggatttt
aatgaccactgcccaactgtgacaaccaaactcgcaacactttgtactggcaaggatgcc
atcttagtcactgcagtggatgaggatgcagcacccaatggagctccattcaccttcaat
gttgtcccagaaggaactaaggggaaatggacagtcgagtatttaaacgataccactgcc
atcttcagaacctctgaaaagctgtggccgggacaatacgagctgatggtggacgtcaag
gaccagcaggggttgtcatgtccaaaacctcataaaattccagtggaagtgtgcacctgt
agcgaacagggggcttgtgcccgagaaggtggaacaagtggaataagtggaggagccgga
gggcttaagaggggatctaggttgggacctgctggaatcggtctactcttccttggactc
ctttcattattgctcatcccactcttgttgctgatgtgtaagtgtggagctactgggatg
gtaggagctttcagagacatgccctttgacactaaagagcatctcatatcctaccatacc
gagggtcagggagaggacagggatgttcctgttcctgttgaaccagccaatatttttgtt
gatggtggtggtggtggtggtggtggtgtaaggaatttttcgtcaagagaagtgaatagc
atgcgtatgataggagctggaggagccggaggagctgcatacttggactcctcatccaca
atgggtggccgtggctacaatgaaatggaaatgtcctacatggactcgatgaggagaagt
gaggcttttaggggtagagaaatggctggagattttgacggaatggccttgtctgatatg
ttcctggcagaatactattcacagaaaagccgtgcaatggaggatgggtttgctaagaat
gaacctaaggtgtatgattatgaagggaatggttctcctgtgggctctgtgggctgctgc
agcatcctcgaagataacaatgacctagagtttctcaatgacctcgggcccaagttcact
actcttgctgacgtatgtggagggagaaagcctgagatcccagcccctgcccccgctcct
cttcctccggctcccagacccatcgtgaaccgtaccgacgtggtgtcttcatcaaccaac
gttatcaattcggggaatattgtcactagcagagtacctacaaacccagtgaatctagct
tccaacacggccacatctactcgtgtggagaatgttgtggttaccgacagccgacccaca
gtgattgcgaatgtccaacccgctccaacactcctgatgcaaccgcagccaatgtactac
atggtcgagccccagcccagcacagtactcctcaccgaaaggcccgccatgggacagaac
atgtacgtgctgaacagcggcccagtaaccgagggagttgtagtccaaggcggcaacata
gcgacgaataccctgacccgcggcgagagaatggttcttgtggacaggggtgcacctgct
caggctgggatgctgcacacaagtaacctgtctggatcacaattgctcctggtggatgcg
ggagccagcagcggtcaagtccttcaggggacgcttcaaagaggggttgctggatctcag
ggcctgatggttgttgaaggacaagggggtcaattgattcaggggtccacccaacagggc
gtttccactggtggatctcaaaatttcctttatatggagagcaaagggccatcaggtgtg
ggccaaggaggttttcagaaggggatgacatccaccgcagggtcatttggtagcgttgga
ttaggcggaggatctgttcagattaaccaaaacccatcgtcacataaaatcttccatgag
agtaaggttatgacaacacaaaatatcaagtaa
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