Garra rufa (doctor fish): 141283118
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Entry
141283118 CDS
T11039
Symbol
rngtt
Name
(RefSeq) mRNA-capping enzyme
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141283118 (rngtt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141283118 (rngtt)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
141283118 (rngtt)
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
141283118 (rngtt)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
141283118 (rngtt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
PTP-NADK
Y_phosphatase2
SPN1_m3Gcap_bd
Y_phosphatase
PTP-SAK
Motif
Other DBs
NCBI-GeneID:
141283118
NCBI-ProteinID:
XP_073672496
LinkDB
All DBs
Position
13:complement(22113378..22275946)
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AA seq
598 aa
AA seq
DB search
MSQIGAPPRWKNCPRRGQPVAGKFLPMKTMLGPRYDDKVPEENRFHPSMLSNYLKSLKVK
MGLLVDLTNTSRFYDRAEIEKEGIKYVKLSCKGHGECPTVETTEMFIRLCEHFIEKTPTE
LIGVHCTHGFNRTGFLICAYLVEKMDWSIEAAVAAFAQARPPGIYKADYLKELFRRFGDV
EDAPPAPALPEWCFDDDEDEDVDDDGNAIAQGSEPSSSHSSQGKKKKERLKMNAVFLEGV
SVKGVTQVTSQPKLSQIQRKCQEFSEWDKSGFPGAQPVSMDRRNIRFLEQKGYKVSWKAD
GTRYMMLIDGKDDVYMIDRDNSVFQIANLEFPFRKDLRIHLSNTLLDGEMIIDKVNGQPV
PRYLIYDIIKFNGQPVGQCDFNRRLLCIEKEIISPRFEKMKLGQIDKSKEPFSVRNKPFF
DIHAARKLLEGSFTSQVSHEVDGLIFQPIGKYKPGRCDDILKWKPPSHNSVDFRLKITKV
GGEGLIPQTVGLLYVGSYDMPFAQMKITKDLKQYDNKIIECTFVNNTWVFMRQRIDKSFP
NSYDTAMAVCNSIQHPVTKEILFEFLDRCAQVQSRKHSADAELMPPPPPKRANHTIPQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaatcggagcgcctccgcgatggaagaattgtcccagaaggggacaacctgtg
gctggcaaatttctgcccatgaaaaccatgcttggaccacggtatgatgataaagtccct
gaggaaaacaggtttcatcccagcatgctgtccaactatctcaaaagcttaaaggtgaag
atgggtttgctggtggacctgacgaacaccagccgcttctatgatcgagcagagatagaa
aaagaaggaataaaatacgtcaaactttcctgcaaaggtcatggtgagtgccccacagta
gagacgacagagatgttcatcaggctgtgcgagcatttcatagagaagacgcccacggag
ctcatcggcgttcactgcacgcatggcttcaaccgcaccggctttttaatatgtgcctac
ctggtggagaaaatggactggagtatcgaggccgctgtggcagcgttcgctcaggctcgg
cccccgggcatctataaagccgactatcttaaggagctcttccgccgcttcggggacgtg
gaggacgcgccacctgcccctgctctccctgaatggtgctttgatgacgatgaggatgaa
gatgtggatgatgatgggaatgccatcgctcagggctccgagcccagctcctctcactcc
agtcaggggaagaagaaaaaagaacggctaaaaatgaatgctgtgtttctggagggagtt
tctgtcaaaggagtcactcaagtcacgtcacagcccaagctcagccagatccagaggaaa
tgtcaggagttctcagagtgggacaaatcggggtttcctggtgctcagcctgtatcgatg
gaccgtaggaacattcgtttcttggagcagaaaggttataaagtcagctggaaagcagac
ggcacgcggtacatgatgttgatagatggaaaagacgatgtgtatatgattgacagagac
aactcggtctttcaaatagccaaccttgagtttcccttccggaaggatcttcgcatccac
ctttccaacacacttctggatggggagatgattatcgacaaagtgaacggtcagcctgtc
ccacgatatctcatctacgacatcattaaatttaacggtcagcctgtgggtcagtgtgac
ttcaacagacgtctgctgtgtatcgagaaggagatcatctccccacggtttgaaaaaatg
aagctgggccagattgataaatccaaggagcccttcagcgtcaggaacaagcctttcttc
gacatccacgctgcgcgcaagctcctggagggcagtttcacctcgcaggtcagccatgaa
gttgatggtcttatcttccagcctatagggaaatataagccgggcagatgtgatgacatt
ctgaagtggaagccgcccagccacaactcggtcgatttcagactcaagatcaccaaagtc
ggcggggagggactgatcccgcagacggtgggtcttctctacgtggggagctatgacatg
ccctttgcacaaatgaagataacaaaggacctgaagcagtacgataataaaataattgag
tgcacgttcgtcaataacacctgggtgttcatgcgacagaggatagacaagagcttcccc
aactcatatgacacagccatggctgtgtgcaacagtatccagcatcccgtcacaaaggaa
attctctttgagtttttggaccggtgcgcccaggtgcagtcccgcaaacactcagccgac
gccgagctcatgccaccgcctccaccaaagagagcgaaccacaccatcccgcagtag
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