Garra rufa (doctor fish): 141283256
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Entry
141283256 CDS
T11039
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141283256 (gtf3c2)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
141283256 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
WDR55
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_WDR11_1st
WD40_RFWD3
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
141283256
NCBI-ProteinID:
XP_073672645
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All DBs
Position
13:34068993..34096932
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AA seq
869 aa
AA seq
DB search
MAAAVLKLGEQKGKKMGLPCEKDTDDKPAQINHESKGVTQDSSEVLDSSESQKMESKMQM
PGQTPSSEVPPGVDQENPLNTEETQKKQEPKTKTPAKRRRKEIIPQTPPQHDNSAVSDTS
ELNSSGRPKRRAAKAALDYLHKLAKDLGAPSESSIKDRSPPKSGEADGADQKKKTPRGRG
TKRKIPDYESDLDDDEDFSPGKDEEEEDDEEDSEPDFSLTLERRLSRPSSKPSSRPPNRP
PRGNYCLLPNGLANNVMEPVWNCFSRTKKFRDENLSPWVFPEWIPSAKDCHFLSNSEAEK
YLPQEKESASFTFTRESIKGQTKLQTVKRFESLPYHSERWDALFFVGGPVRSLEWCPCPD
GAAKRQYAAIYCHKGMDDEHKINKLHTGPVLLQLWDIGNLQCKSRPSTAPHLAYALAIDD
GCIWNMRWCPAGVWELPSTSRKAPQMPRLGVLAAAFSNGTIGVYSLPHPEALAAHHQSKG
ESSQAPLICRVKKVLTLKMGSNQADHKGQSGLCFAMDWLHVKPHNLLAAGFYDGLVALWD
LASKSTLLKVRCPDEGVSLYPYHCFHAHDENIRTLCWCRGSSNLLVTVGDDRMAKMWDIR
KTYVPLLAVKRCLSPEVYWPLFWSGILMAQECCFATFGQHGVHYFDSGYLGIKPYFVCPR
KATIWSLSMSDWINAFAVADNAGDCLFSLLPEMDVDPNTIRRRKYSVYRTDMVQFEPGQR
PENEEQEEDLENNASNPRKEPLSYKGAIRKYYLHFHDLDLGNFAKCETRPMMKHLQQYEV
KGVAKVDQMPLSALYKVRFNPNMDAYNWILSGGQSGLVRVNCARGLSCSVMLKQLRESQA
QFSAMFQSQEPDDSATAVRHSTADTVQVH
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgtcctgaagctgggcgagcagaaaggcaaaaaaatgggtttgccatgt
gaaaaggacacggatgacaaaccggcacagattaaccatgagagtaaaggagtgactcag
gattcaagtgaagttcttgactcttcagagtcacagaagatggagtcaaagatgcaaatg
cctggacaaacacctagctctgaggttcccccaggggtggaccaggaaaacccacttaat
acagaggaaacgcaaaagaagcaagaacctaagacaaagactcctgccaaacggagaaga
aaggagatcattccacagactccaccacaacatgacaattcagcagtctctgatacttct
gaactcaattctagtggtcggcccaagaggagagctgctaaagctgctttagactatctc
cacaaacttgccaaggatcttggtgctccatcagaatcttccattaaagaccgttcaccg
cccaaatctggggaagcagatggcgctgaccagaaaaagaaaacgccaaggggaaggggg
acgaaaagaaaaattccagattatgaaagcgacttagatgacgatgaggacttttcccct
ggaaaagacgaagaggaggaagatgatgaagaagattcagagccagacttcagcttgact
ttggagcgcagattatccagaccatccagtaaaccatccagcagaccacccaacagacca
cccagaggaaattactgtctgcttccaaatggattggctaacaatgtcatggagcctgtt
tggaactgttttagtagaaccaaaaaattccgggatgaaaacctttccccctgggtattt
ccagagtggattccttctgccaaagattgtcatttcttgtctaacagtgaggctgaaaaa
tatttaccccaggagaaagagtccgcttcttttacctttacacgggaaagcatcaaggga
cagaccaaactgcaaacggtgaaaagatttgaatcattgccatatcattctgagcgctgg
gatgctctgttctttgtgggaggtcctgtacggtccttggagtggtgcccatgtcctgac
ggggcggcaaaaagacagtatgccgccatctactgccacaaaggcatggacgacgaacac
aaaatcaataagctgcacacaggtcccgtcttactgcagctgtgggacatcggaaacctt
caatgcaaaagcaggccctcaactgctccccatctagcatatgctttggcaatagatgac
ggctgcatctggaatatgagatggtgtcctgcgggagtgtgggagctgccttctaccagc
agaaaggctccacagatgcctagattaggtgttctagcagcagctttctctaatggaacc
attggtgtctacagtcttccacacccagaagcccttgcagcacaccatcagagtaaaggt
gaaagcagccaagcaccgctgatatgccgggtgaaaaaggttttgactctgaagatgggc
tctaaccaggcggatcataaaggtcaaagtggtttgtgctttgctatggattggctccat
gtcaagccacataacctcttggctgctggcttctatgatggtctggttgctttatgggat
cttgctagtaaatctacgctactgaaagtcaggtgtccagatgaaggtgtgtctctctac
ccgtaccactgttttcatgctcatgatgaaaacatccggacactgtgctggtgcagaggc
tcaagtaacttgttggtgacagtcggagatgaccgaatggctaaaatgtgggatataaga
aaaacctacgtgcctcttttggcagtaaagcgctgcttgtctcctgaagtgtactggccc
ctgttttggagcggcatcctgatggctcaagagtgttgctttgccacgtttggacaacat
ggagttcactattttgattcaggttaccttggaatcaaaccttactttgtgtgtcctaga
aaagccactatttggagcctttctatgtctgattggataaatgcttttgccgttgcggac
aatgcaggagattgtttatttagtttgcttcctgaaatggacgtcgaccccaacactatc
agacgacggaaatattcagtgtacaggacagacatggtccagtttgaacctggtcagagg
cctgaaaatgaagaacaggaggaggatttggaaaataatgcaagtaatcctaggaaggag
ccgctgagctacaaaggagcgatcagaaagtactatctccactttcatgacttagacctg
gggaactttgctaaatgtgaaactcggcccatgatgaagcacctgcaacagtatgaggtc
aaaggtgttgcaaaagtggaccagatgccactgagcgcactctacaaggtccgttttaac
ccaaacatggatgcatacaactggatcctgtcgggcgggcagtcgggtttagtgcgtgtg
aactgtgcgcgtggactgagctgctctgtgatgctaaagcaactacgtgaaagtcaagcc
cagtttagcgccatgttccagtctcaggagcctgatgactctgcaacagctgtccgtcac
agcacagcggatacagtacaagtgcactag
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