Garra rufa (doctor fish): 141283340
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Entry
141283340 CDS
T11039
Symbol
six1b
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141283340 (six1b)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
141283340 (six1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
141283340
NCBI-ProteinID:
XP_073672723
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Position
13:complement(6817141..6819090)
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AA seq
284 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENSNTGANKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSVLLLQGNMSH
PGASAYSMTGLGAAQSVHGMQGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgttgccttctttcgggtttactcaggagcaagtcgcgtgtgtgtgcgaggtg
ctgcaacaaggggggaaccttgagcgtctcggccgttttctgtggtctcttccggcttgc
gaccatctccacaagaacgagagcgtcctcaaagccaaggctgtcgtcgcctttcaccgt
ggaaacttcagggaactttataagatactagagagtcaccagttctctccgcacaaccat
cccaagctgcagcagctgtggctcaaggcccattacgttgaggctgagaagctgaggggg
cgaccgctgggagcggtggggaaatatcgagtgcggaggaaatttcctctgccacgcaca
atatgggacggcgaggagaccagctactgttttaaggagaaatcccgcggtgtgttgagg
gagtggtacacgcacaacccctatccatctcctcgggaaaagagggagctggccgaggcc
acagggctgaccaccacacaagtgagcaactggtttaaaaacagacggcagagggatcgc
gcagcggaggcaaaagaaagagagaacagcgagaacagcaacacgggcgctaacaaacag
aaccagctgtcaccgctggacggcgggaagtccctgatgtcaagctcggaggacgaattc
tcgcccccgcagagtcctgaccagaactccgtgctcctgctccagggtaatatgagccac
cccggcgcgtccgcgtactccatgaccggcctcggcgccgcacagtcggtacacggcatg
caaggacacccacatcagcttcaggattcattactgggacctttaacttcaagcctagtg
gacctcggttcttaa
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