Garra rufa (doctor fish): 141283362
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Entry
141283362 CDS
T11039
Symbol
plcb4b
Name
(RefSeq) LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00562
Inositol phosphate metabolism
grf01100
Metabolic pathways
grf04020
Calcium signaling pathway
grf04070
Phosphatidylinositol signaling system
grf04081
Hormone signaling
grf04082
Neuroactive ligand signaling
grf04261
Adrenergic signaling in cardiomyocytes
grf04270
Vascular smooth muscle contraction
grf04310
Wnt signaling pathway
grf04371
Apelin signaling pathway
grf04540
Gap junction
grf04621
NOD-like receptor signaling pathway
grf04912
GnRH signaling pathway
grf04916
Melanogenesis
Module
grf_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
141283362 (plcb4b)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141283362 (plcb4b)
04371 Apelin signaling pathway
141283362 (plcb4b)
04020 Calcium signaling pathway
141283362 (plcb4b)
04070 Phosphatidylinositol signaling system
141283362 (plcb4b)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141283362 (plcb4b)
04081 Hormone signaling
141283362 (plcb4b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
141283362 (plcb4b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141283362 (plcb4b)
09152 Endocrine system
04912 GnRH signaling pathway
141283362 (plcb4b)
04916 Melanogenesis
141283362 (plcb4b)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
141283362 (plcb4b)
04270 Vascular smooth muscle contraction
141283362 (plcb4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141283362 (plcb4b)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
141283362 (plcb4b)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
141283362 (plcb4b)
Endocytosis
Macropinocytosis
Phospholipase C
141283362 (plcb4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
PH_14
PLCB1-4-like_EFh
PLC-beta_C
EF-hand_like
C2
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
141283362
NCBI-ProteinID:
XP_073672743
LinkDB
All DBs
Position
13:38924832..38970693
Genome browser
AA seq
1187 aa
AA seq
DB search
MTKSYEFNWQKHIPDFLQEGAVFDRFDEDPFVFEPSCHFKIDEFGFFLTWKSDGKEGQLL
ECSLINSIRPGVVPKDPKILASLEAAGKSEADLDGRIICVCSGPDLVNLSFMYMVTDNTD
TFKKWMEGLKSVIHNFKANNVCPMTCLKKHWMRLSFLTNVNGKIPVRGITRTFGSGKTEK
GIFQALKELGLPSGKNDEIEHSAFTFDIFYALTQKICPRTDIEELFKKINGDKSDYLTVE
QLVSFLNENQRDPRLNEILFPFYDGKRVMQIIEKYERDADLKKKGRMSSDGFCRYLMSDE
NAPVFLDRLDLCQEMDQPLAHYFISSSHNTYLTGRQFGGKSSVEVYRQVLLSGCRCVELD
CWDGKSEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCRXNRQRSL
SASCSLWLRMPIEQLESFKKHMEAGEMSIQAGEDENDEDLDSALDGKELNSDMKTSNTLS
LLEDPSDPDAQDNSLRKKIPEDDVTEISEATEITDATDVSEASDLENKKKGVETAEDADA
EQQLIASYKYEGATTNIHPYLSAMVNYAQPVKFQGFEVAEERNIHHNMSSFNESVGLGYL
KTNAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQLNQGK
FEYNGACGYLLKPDFMRRADRMFDPFSETPVDGVIAATCSVQVFSGQFLSDKKIGTYVEV
DMYGLPTDTIRKEFRTRMVMNNGLNPYYNEEPFVFRKVILPDLAVLRIAVYDDNNKLIGQ
RILPLDGLQAGYRHISLRNEGNKPLSLPTVFCNIVLKTYVPDGFGAIVDALSDPKKFLTI
AEKRADQMRALGIDTSDIADVPNENCKSDKKGKVSQVKTNVTPQSSSEVNATQNNIGETK
RDNSAIVNQVNIEDLKQMKTFIKLMKKQQKELNTLKKRHAKEHNAMQKSHCTQVDKMVAQ
HDKEKFTLEKLLEKAIKKRGENNCSELKKETAIKVETLTTDHKEKVKDMVAQHTKEWSEM
INCHSTEEQEMKDAHVTQQCELLKKLLASFQEQQTLQLKIIHERQSKEMKANQAKSSMEN
SKAISQDKSIKNKAERERRVRELNSSNTKKFLEERKRLAMKQAKELEQLQKSQREQLEKL
EKFNEQLLKSHHANSQTQGQRHAEDGEAGGGHGPQTSHSGVSAPSVN
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcatacgagttcaactggcagaaacacattcctgatttcctgcaggaagga
gccgtgtttgaccgattcgatgaggatcccttcgtctttgagcccagctgccatttcaaa
atcgacgagtttggcttctttctcacatggaagagtgacggaaaggaaggccagcttcta
gaatgttcgctgatcaacagcatccgtcccggagtcgtgccgaaggacccgaagatcctg
gcgtctctggaagcggcggggaagagcgaggcggatctggacggtcgcatcatctgcgtc
tgcagcgggccggacctggtcaacctcagcttcatgtacatggtgacggacaacacggac
acgttcaagaaatggatggaaggcctgaaatctgtaattcacaatttcaaggcgaataat
gtgtgtccaatgacgtgcctgaagaaacactggatgaggctgtccttcctaacgaatgtc
aacggcaaaatcccggtccgaggcataacgcggacgttcggctcgggtaaaacggagaaa
ggaatcttccaggcgctgaaggaactcggtctccccagtgggaagaatgacgagatcgag
cattcggccttcaccttcgacatcttctacgctctgacgcagaagatctgccctcgcacg
gacatcgaggagctcttcaagaagatcaacggagacaaaagtgattatttaaccgtagag
cagttagtcagctttctgaatgaaaaccagcgggaccctcgactcaacgagatcctcttt
cccttctacgatggcaaacgagtcatgcagatcatcgagaagtacgagagagacgccgac
ttaaaaaagaaaggtcgcatgtccagcgacggcttctgccgctacctgatgtctgacgag
aacgcgccggtgtttctggaccgtctggatctgtgtcaggagatggaccagccgctggct
cattacttcatcagctcctcacacaacacttacctgacgggccggcagttcggcgggaag
tcttcggtggaggtgtacagacaggtgctgctgtccggatgcaggtgtgtggagctggac
tgctgggatggtaaaagtgaggatcaggagcccatcatcactcatgggaaggccatgtgc
accgacatcctgttcaaggatgtgattcaagccataaaggaaacagcgtttgtaacgtct
gaatatcctgttattctgtcatttgagaatcactgcaggtaaaaccgccagcgttcgctc
tcagcctcgtgttctctgtggcttcggatgcccattgagcagctggagtcatttaagaag
cacatggaggctggagagatgagcatacaggcgggagaagatgagaatgatgaagatctg
gacagtgcgctggatggtaaagagctgaactcagacatgaagaccagcaacactctgtct
ctgttggaggatcccagcgatccggacgcgcaggacaacagtctcaggaagaagatccca
gaagacgacgtcacagagatctcagaagcgactgaaatcacggacgccaccgacgtgtct
gaagcgtcggacctggagaacaagaagaagggtgtggaaacggccgaagacgccgacgcc
gaacagcagctcatcgcctcgtataagtatgaaggagccacgaccaacatccacccgtat
ctgtccgccatggtcaactacgctcagcccgtcaagttccagggcttcgaggtcgcagag
gagaggaacatccatcacaacatgtcgtccttcaacgagtctgtgggtttgggctatctg
aagacgaacgccattgagtttgtgaactacaacaagcggcagatgagccgcatctacccc
aaaggaggccgcgtggactccagcaattacatgcctcagatcttctggaacgccggctgc
cagatggtgtctctgaacttccagactccagatctgggcatgcagctgaaccaggggaag
ttcgagtacaacggcgcatgcgggtacctcctgaaaccagacttcatgcggcgcgcggac
cggatgttcgacccgttctctgagacgccggtagatggagtgatagcggcgacctgcagc
gtacaggtgttctcgggtcagttcttatcggataagaagatcggcacgtatgtggaggtg
gacatgtacggccttcccacagacaccatccggaaagagttccgcactcgaatggtgatg
aacaacggcctgaacccgtactacaacgaggagccctttgtcttcaggaaggtgatcctg
ccggatctggccgtgttgcgtatcgcggtgtacgacgacaacaataagctgatcggtcag
aggatcctgccgctggatgggctgcaggcgggttacagacacatatctctgcgcaacgag
ggcaacaagccgctgtcgctgcccaccgtcttctgcaacatcgtcctcaagacatacgtg
cctgacggcttcggcgccatcgttgacgctctttccgatccaaagaagttccttaccatc
gcagagaaacgcgccgatcagatgcgagctctcgggattgacacgagcgacatcgcagac
gtgcccaacgaaaactgcaagagtgataagaagggaaaagtgagtcaagtgaagaccaat
gtgacgccgcagagcagctccgaggtgaacgccacacagaacaacatcggcgagaccaaa
cgcgataattctgccatcgtgaatcaggtgaacattgaagatttaaagcagatgaagacc
ttcattaaactgatgaagaagcagcagaaggaactgaacacgctaaagaaacgacacgct
aaggaacacaacgcaatgcagaaatcgcactgcacacaggtggacaaaatggtggctcag
catgacaaggagaagttcacgctggagaagctgctggagaaggccatcaagaagagagga
gaaaacaactgctccgagttaaagaaggaaacggccataaaggtcgagacgctcacgacg
gaccataaagaaaaggtgaaggacatggtggcgcagcacactaaagagtggtcagaaatg
atcaactgtcacagcacagaggaacaggaaatgaaggacgcccacgtgacgcagcagtgt
gagctcctcaagaagctgctggccagctttcaggagcagcaaacactgcagctcaagatc
atccacgaacggcaaagcaaagagatgaaggccaatcaggcgaagtcgtcgatggagaac
agcaaagccatcagccaggacaaaagcatcaaaaacaaggcggagcgcgagaggagagtt
cgggagctgaacagcagcaacaccaaaaagttcctggaggagagaaaaaggctggccatg
aagcaggcgaaggagctggagcagctgcagaaatctcaacgagagcagctggagaaactg
gagaagttcaacgagcagcttttgaaatcacatcatgcaaacagtcagactcaaggccaa
agacatgcagaagatggtgaagctggaggaggacatggaccgcagaccagccacagtggt
gtaagcgctccatccgtcaactga
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