Garra rufa (doctor fish): 141283365
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Entry
141283365 CDS
T11039
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
grf Garra rufa (doctor fish)
Pathway
grf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141283365 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141283365 (taf4b)
03036 Chromosome and associated proteins [BR:
grf03036
]
141283365 (taf4b)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141283365 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
141283365 (taf4b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
141283365 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
141283365
NCBI-ProteinID:
XP_073672747
LinkDB
All DBs
Position
13:complement(8344387..8367087)
Genome browser
AA seq
833 aa
AA seq
DB search
MSETSGSDKLDGENNDAQTINTEEKTSQTSLDNKKETLDSNANVVNTSENSKTDLASPNG
EGEQPKSKQETDSSNSASQRPVTASSEPAPKIIAGPAQIRSTTPVVVGARVVTSNVQGPG
ATSLALVPQPGRVTVSSVSISQPRVTTLTTAKGTVVTLPRISTPSQSVPMTRTPQTVPLQ
LPANFQVPQGMVLIRSDSGQLMLVSQQALAQAQAQGMLPKPASANAAAIVRPPSSQATVT
TTPIIRVSLPPSSASATTNIKLNPTTGTAIQKPPTATGSAIFTPSCTTGTTIIKPAGVVG
TAIRKPSSTMGPVIKASQMTPNSSTPGTFNQRTNSVTATTIINTSAVKSVGKGALSTQGN
APRMVSPNVPSRSSSNTSSTPVTVTAETLENVKKCKNFLVTLMKLASSGTRSANMAQNVR
ALVKGLLDGKLEAEEFTEKLYMELKSSPQPYLVPFLKRSLPAVRQLTPNSQLFIQQCDQL
KPSDSAPAKASNQKSAVSVSSSFKPNQPTRTAQLVIQQPKGVIVKQSLTQAGFPAQNQTQ
PKQMLIQTNTQPAGAVVRQSILQASKTHFSQPPLPAQAHGFKDSTSGSFRDDDDINDVAS
MAGVNLSEENARILASGSEYVGSVIRSCQEEPFLFPSALKSRVLQIGGSLSITEVCPDVL
ELLSLATQERLRDLLEKITVVAQHRQISYKDDWRYSQTNDTRSQLKFLEQLERLEKQRRE
EEEREALLRIARSRTNTEDPEQQRLKQRAKEMQQLELAQMEYRDANLAALAALGPRKRKP
LEAPGSGANQLLGSCGQFATRAPIRVTLRDLTFCMEQDPTFRHTLMLYRTFLG
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacatcgggttcagataaattagacggagaaaacaacgacgcgcaaacaatc
aacactgaggagaaaacttcgcaaacttctttagacaataaaaaagagacgttagactca
aacgctaatgttgttaacacctctgaaaacagcaaaacagatttagcttcccctaatggc
gaaggagagcagccaaaatcaaagcaagagactgattcatcaaactctgcaagtcagcgt
cctgtaacagcctcatctgaacctgctccaaagatcatagcaggccctgcacagatcaga
tccaccacaccggtggtcgtaggagccagggtggtcacatctaatgttcagggaccaggg
gccaccagcttggcactggtacctcagcctggaagggtgactgtaagctctgtctccata
agccagcccagggtcaccacactgaccactgccaaggggacagttgtgacattgccaagg
atttccaccccatcacaaagtgtaccaatgacacgcacacctcaaactgtgccactgcag
ctgcctgccaacttccaggtcccacaaggaatggtgttaatccgcagtgacagtgggcag
ttgatgttggtatctcagcaggctctggcccaggcacaggctcagggaatgctgccaaaa
ccagccagtgccaatgctgctgctatagttagacccccatcctcacaggcaactgtaacc
actacaccaatcatccgagtttctctcccaccttccagtgcatcagctactaccaatatt
aaacttaaccccactactgggactgccattcagaaacctcccaccgctacagggagtgct
attttcacgccatcatgtacaacaggaaccaccattattaaaccagctggtgttgtaggg
acagccatcagaaagcccagctctaccatggggcctgttatcaaagctagtcaaatgact
ccaaacagcagcacaccggggacctttaaccagaggactaattctgtcactgcaactacc
ataattaatacctctgctgtaaagtctgtgggcaaaggtgctctctccacccagggtaat
gccccacgtatggtgtctcctaatgtaccatccagatccagctcaaacacatcatcaacc
ccagtcactgttacagctgagaccttggagaatgtgaagaagtgtaaaaacttcctggtt
actcttatgaagctcgcatcgagcggcactcgctcggccaacatggctcagaacgtcaga
gctcttgtcaaaggcctgttggatggaaaactagaggcagaagagtttactgaaaaactc
tatatggagctcaaatcatcccctcagccatatctagtgcctttcctgaagaggagcctg
ccagctgtccgtcagctcaccccaaactcgcaactcttcattcagcagtgtgaccaactc
aagccctcagattcagcaccagccaaggcctcaaaccagaagtccgctgtgtccgttagc
tcctccttcaagcccaaccagccaaccagaacggctcagctggtgatccagcaacctaaa
ggagtaatcgtcaaacagtctttgactcaggcgggctttcctgcacagaaccaaactcaa
cccaaacagatgctcattcaaactaacactcagcctgcaggtgctgttgtgcggcagtcc
atccttcaggcgtctaaaacacacttttcccagccgccccttccagcacaggcacacggc
ttcaaggacagcacctcgggctctttccgagatgacgatgacattaatgatgtggcctcc
atggccggagtgaacctgagtgaggagaacgcacggattttggcctctggctctgagtat
gtgggatcagtgatccgctcctgtcaagaagagccctttttattcccatcagccctaaag
tcacgagtgctgcagatcggtggatctttgagtatcacagaagtctgtcctgatgttctt
gaattgctctccctggcaacacaagagaggcttcgagacctgctggagaagataactgtt
gtggcacaacatcgacagatctcttataaggatgattggcgctacagtcagaccaatgac
acacgctctcagctgaagttcctggagcaactggaaagactggagaaacagaggagggag
gaagaggagcgagaagccctgctccgtattgcccggagtcgcacaaacaccgaagaccca
gagcagcagcgtctgaaacagcgagccaaagagatgcagcagttggagttggcacagatg
gagtacagagatgcaaatttggcagcgctggcagccctggggccccgtaagaggaaacct
ctggaggctcccggctcaggggccaaccagttgttaggttcatgtgggcagtttgctact
cgagcaccgattcgagtcactttgagagatctgaccttctgcatggagcaagacccgaca
ttcaggcacactctcatgttgtatagaacgtttctaggctag
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