Garra rufa (doctor fish): 141283556
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Entry
141283556 CDS
T11039
Symbol
lrfn2b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141283556 (lrfn2b)
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141283556 (lrfn2b)
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
SALM family
141283556 (lrfn2b)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
141283556 (lrfn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
LRR_5
Ig_2
Ig_VEGFR-1-like_5th
LRR_9
GP79
Motif
Other DBs
NCBI-GeneID:
141283556
NCBI-ProteinID:
XP_073672938
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Position
13:285662..389142
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AA seq
785 aa
AA seq
DB search
MDPVLCQMLVLGMAVVMARACPKYCMCQNLSESLGTLCPAKGLLFVPPDIDRSTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFGDLETLRSLHMDNNRLVELGPDDL
RGLVSLQHLILNNNQLGRISEKAFEDLAASLEDLDLSYNNLQSLPWHSVRQMINLHQLSL
DHNLLDYIPEGTFVDLERLARLDLTSNRLQKLPPDPIFARAQDSEVMTTPFTPQLSLSIG
GNPLHCNCELLWFRRLERDDDLETCASPPVLKGRYFWNVREDEFLCEQPLITQHTHRMLV
LEGQTASLRCEAIGDPTPTIHWVTPDDRLLGNSSRTVLYRNGTLEILITTSKDYGTFTCI
AANLAGESTASVELSIIQLPHISNGTGQASQPKSRLSDITGSSRTSKGAPKSQPEKAVSV
SEVTAVSALVRWSVSKTAPKVKMYQLQYNCSDDEVLIYRMIPSSSKAFHVTNLVSGTLYD
LCVLAAWDDSATTLTATNVVGCVQFYTRDEYPQCQSLHGQLLGGTMILVVGGVIVATLLV
FIVILMVRYKAGDGGGGGQTPASKLSNVSETYSQTNGGRPGQNGVPLLAPKPRVTMQDEV
VEFKCGSLQSSVSSSSSSSSSGSADPTSYSPNSALANIWRSAPPKPRNNLDQLLGAFTSL
ELRGQAKEPRPSGGPASTASAAGASAPAGQTDKEPLLGRTLDSRLSKLLMLPLDSKPKRS
HSFDMGDFTVSTAQQLCSYPRRISSIWTKRSLSVNGMLLQCDEEGDSGGSKGTNESSEWV
MESTV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgtgctctgtcagatgctggtcctgggtatggctgtagtgatggcccgtgcg
tgtcccaagtactgcatgtgccagaacctctcagagtctctggggaccctgtgtccggcc
aaaggcctgctcttcgtgcctcccgacatagatcgcagcactgtggagctccggttgggg
ggaaactacatccttcgaatcacacaacaggactttgccaacatgacagacttggtggac
cttacgctctcccgaaacaccataagctacatccagcccttttcctttggggacctggag
acccttcgttctcttcatatggataacaaccgtttagtggagttgggccccgatgacctg
agagggctggtcagcctgcagcatctcatcctcaataacaaccagctgggtcgcatctca
gagaaggcgtttgaggaccttgcggcatcgctcgaggatctggacttgtcttacaacaac
cttcagtctctgccctggcattcagttcggcagatgatcaacctgcaccagctgagtctg
gaccacaatttgttggactacattcccgagggaacttttgtggatctggagaggctggcc
cgcttggacctgacctctaatcgactccagaagcttccgccagaccctatctttgccaga
gcgcaggattctgaagtgatgactacgccgttcacccctcagctctcgctcagcatagga
ggaaacccgcttcactgcaactgcgaattgctttggttccggcgtctggagcgagacgac
gacctggagacttgtgcctcgcctcctgtcctgaagggccgctacttctggaacgttcgg
gaggatgagtttttgtgtgagcagccgttgattactcagcacacccacaggatgctggtt
ctggagggacagaccgccagtctacggtgcgaagccattggagatcccaccccaaccata
cactgggtcaccccagacgatcgattgctcggtaactcctctcgcactgtgctgtaccgc
aatggcaccctggaaatcctgatcaccacttcgaaggactacggaaccttcacttgcatt
gcggccaatctggctggtgaatcaactgcttcagtggagctgtcaattattcagctaccc
cacataagcaatggcacaggccaggcatcgcagcccaagtcccgcctgtcagacattaca
ggcagctccaggaccagtaaaggtgctcccaagagccagccagagaaagcggtgtctgtg
tctgaggtgactgccgtgtctgccttggtcaggtggtccgtcagcaagaccgctcccaaa
gtcaaaatgtaccaactacaatacaactgctcagatgatgaagtcctcatctacaggatg
attccttcctccagtaaggccttccatgtcaccaacctggtatctgggactctgtatgac
ctgtgtgttctggccgcctgggacgactccgccacgacgctcactgccaccaacgtggtg
ggctgcgtgcagttctacacccgggacgagtatccacagtgccagtctctacacgggcag
ctgctgggcggcaccatgatcctggtggtgggcggagtgatcgtggccacgctgctggtg
ttcatcgtcatcctgatggtgcgctacaaggcgggggacggcggagggggcggtcaaacc
cccgccagcaagctgagcaacgtcagcgaaacgtactctcaaaccaacggagggaggccg
gggcagaacggagttcctctgctggcaccaaagcccagagtcaccatgcaggacgaagtg
gtcgaattcaagtgtggctctctccagagcagcgtgtcctcttcctcctcctcttcctct
tcaggttctgcagatcccacgtcctacagccccaacagtgctctggccaacatctggagg
tccgcgcctcccaagccccgcaacaacttagaccagcttctaggggccttcacgtcactg
gagcttcggggacaggccaaagagccgcggccgtccgggggcccggcgagcacggctagc
gcggctggtgcctcggccccggcgggccagacggacaaggagcctctgttgggccggacg
ctggactcgcggctaagcaagttgctcatgttgcctctggactccaaacccaagaggagc
cattcgttcgacatgggcgacttcacggtgtccacggcgcagcagctgtgctcgtacccg
cgccggatcagcagcatctggactaaacgcagtctgtcggttaacggcatgctgctgcag
tgcgatgaagaaggggacagcggcgggagcaaaggcaccaacgagagctcggagtgggtt
atggagagtactgtatag
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