KEGG   Garra rufa (doctor fish): 141283696
Entry
141283696         CDS       T11039                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    141283696 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:grf03019]
    141283696 (nup43)
   03036 Chromosome and associated proteins [BR:grf03036]
    141283696 (nup43)
Messenger RNA biogenesis [BR:grf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     141283696 (nup43)
Chromosome and associated proteins [BR:grf03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    141283696 (nup43)
SSDB
Motif
Pfam: Beta-prop_WDR5 WDR55 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 WD40_CFAP43 PapC_C KNTC1_N Beta-prop_SCAP
Other DBs
NCBI-GeneID: 141283696
NCBI-ProteinID: XP_073673111
LinkDB
Position
13:complement(22452461..22465677)
AA seq 371 aa
MDPIAKYISQKISKTRWRPISPALLQQPEVFATGSWDNENNKVSIWSVGDHGVSNMDGEF
DEEPQLLCESQHDGDVMDLQFLDQDRLVSASSSGAVTIFKLQSDCQALSLAHVWDRAHCY
SCDNAPCTAIVCKSPEIVSVGEDGRVILYKADQTEVLRVIENADSSTIHAVTFLRTTEVL
TVNSIGQLKMWDFRQQSDSPAQILSLTGDRVPLHCVDKHPNQQHIVATGGQDGMLYIWDV
RQGNTPFSLIEAHSAEMWEVHFHPSNPNHLFTCSEDGSLLHWETTSGSDMSTLLQRGWNS
RVVSHSAVPLAGENDSVVSSWLAGDSSKNRLEATHILPSQTLSVNSLDVLEQCLVCGTDG
EAVYVHRQVPV
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggacccaatagccaaatacatctcgcagaaaatcagtaagacgcggtggcggcctatt
tctccagcattattacagcagcctgaagtgttcgccacaggatcctgggacaacgagaat
aacaaagtgtcgatctggtcagtgggagatcatggagtctctaacatggacggagagttt
gatgaagagccacagttactgtgtgaatcacaacatgacggggatgtcatggacctgcag
tttctagatcaagacagacttgtttctgcatcatcaagtggggctgtgacaatctttaag
cttcagtctgactgtcaggctctgtcattggctcatgtgtgggatagagctcattgttac
tcctgtgataatgcaccctgcactgcaatagtgtgcaaaagccctgaaatcgtgtcagtg
ggtgaggacggaagagttattctttacaaggcagatcagacagaagtgctccgtgttatt
gaaaatgcagatagcagtacaattcatgctgtgacatttctaaggacgactgaagttctc
actgttaattccatcggtcagctgaagatgtgggacttcagacagcagagtgacagtcct
gcacaaattctctctctcactggtgacagagtgcccttgcattgtgtggataaacaccca
aaccagcagcacatagtggccacaggaggacaggatgggatgctgtatatctgggatgtg
agacagggcaatacacccttctctctcatagaggcccattcagcagaaatgtgggaagta
cattttcatccatcaaatcccaatcacttgtttacgtgctcagaggatggatctctgctc
cactgggagacgacttcaggatcagacatgagcacactcctacagagaggctggaacagc
agggtcgtctctcatagtgctgtaccactggcaggggagaatgactctgtggttagctcc
tggcttgctggagactccagcaaaaatagactggaggcaactcacatcctgcccagccag
acgctgtctgtcaacagccttgatgtgcttgagcagtgtttagtgtgtgggactgatgga
gaggctgtgtacgtccacagacaagttcctgtttga

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