Garra rufa (doctor fish): 141283696
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Entry
141283696 CDS
T11039
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141283696 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141283696 (nup43)
03036 Chromosome and associated proteins [BR:
grf03036
]
141283696 (nup43)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141283696 (nup43)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141283696 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WDR55
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
WD40_CFAP43
PapC_C
KNTC1_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
141283696
NCBI-ProteinID:
XP_073673111
LinkDB
All DBs
Position
13:complement(22452461..22465677)
Genome browser
AA seq
371 aa
AA seq
DB search
MDPIAKYISQKISKTRWRPISPALLQQPEVFATGSWDNENNKVSIWSVGDHGVSNMDGEF
DEEPQLLCESQHDGDVMDLQFLDQDRLVSASSSGAVTIFKLQSDCQALSLAHVWDRAHCY
SCDNAPCTAIVCKSPEIVSVGEDGRVILYKADQTEVLRVIENADSSTIHAVTFLRTTEVL
TVNSIGQLKMWDFRQQSDSPAQILSLTGDRVPLHCVDKHPNQQHIVATGGQDGMLYIWDV
RQGNTPFSLIEAHSAEMWEVHFHPSNPNHLFTCSEDGSLLHWETTSGSDMSTLLQRGWNS
RVVSHSAVPLAGENDSVVSSWLAGDSSKNRLEATHILPSQTLSVNSLDVLEQCLVCGTDG
EAVYVHRQVPV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggacccaatagccaaatacatctcgcagaaaatcagtaagacgcggtggcggcctatt
tctccagcattattacagcagcctgaagtgttcgccacaggatcctgggacaacgagaat
aacaaagtgtcgatctggtcagtgggagatcatggagtctctaacatggacggagagttt
gatgaagagccacagttactgtgtgaatcacaacatgacggggatgtcatggacctgcag
tttctagatcaagacagacttgtttctgcatcatcaagtggggctgtgacaatctttaag
cttcagtctgactgtcaggctctgtcattggctcatgtgtgggatagagctcattgttac
tcctgtgataatgcaccctgcactgcaatagtgtgcaaaagccctgaaatcgtgtcagtg
ggtgaggacggaagagttattctttacaaggcagatcagacagaagtgctccgtgttatt
gaaaatgcagatagcagtacaattcatgctgtgacatttctaaggacgactgaagttctc
actgttaattccatcggtcagctgaagatgtgggacttcagacagcagagtgacagtcct
gcacaaattctctctctcactggtgacagagtgcccttgcattgtgtggataaacaccca
aaccagcagcacatagtggccacaggaggacaggatgggatgctgtatatctgggatgtg
agacagggcaatacacccttctctctcatagaggcccattcagcagaaatgtgggaagta
cattttcatccatcaaatcccaatcacttgtttacgtgctcagaggatggatctctgctc
cactgggagacgacttcaggatcagacatgagcacactcctacagagaggctggaacagc
agggtcgtctctcatagtgctgtaccactggcaggggagaatgactctgtggttagctcc
tggcttgctggagactccagcaaaaatagactggaggcaactcacatcctgcccagccag
acgctgtctgtcaacagccttgatgtgcttgagcagtgtttagtgtgtgggactgatgga
gaggctgtgtacgtccacagacaagttcctgtttga
DBGET
integrated database retrieval system