KEGG   Garra rufa (doctor fish): 141284294
Entry
141284294         CDS       T11039                                 
Symbol
cul5a
Name
(RefSeq) cullin-5a
  KO
K10612  cullin 5
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    141284294 (cul5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:grf04121]
    141284294 (cul5a)
   03400 DNA repair and recombination proteins [BR:grf03400]
    141284294 (cul5a)
Ubiquitin system [BR:grf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     141284294 (cul5a)
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     141284294 (cul5a)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 141284294
NCBI-ProteinID: XP_073673407
LinkDB
Position
14:26987447..27005929
AA seq 780 aa
MAMSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPDDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLM
DKVPNGIEPMLKDLEEHIVSAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPMKQKGVGLKTQPESKCPELLANYCDMLLRKTP
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVSSPKDF
TDSTLFFVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgatgtctaatttgttaaagaacaagggttccctccagtttgaggacaagtgggat
cttatgcgccccattgtccttaagttgcttcgccaagagtccgtaactaagcagcagtgg
tttgatcttttctcagacgttcatgcagtttgtctatgggatgacaaaggaccagcaaag
atccaccaggccctcaaagaggacatcttagattttattaaacaagctcaagcgcgagtg
ctcagtcaccaagatgacacggcgctcctcaaggcttacatcgtggagtggaggaagttc
ttcacacagtgtgacattcttcccaagccgttctgccagctggaaatcaccctgatgggc
aaacaaggcagcaacaagaagtccaatgtggaggacagcattgttaggaagctgatgctg
gacacttggaacgaatctatattctccaacatcaagaatagattgcaggatagtgcgatg
aaattggtccatgctgaacggctgggagaagcgttcgactcgcagctggtcatcggggtc
agagagtcatatgtgaacctgtgctccaatcctgatgataaactgcagatctacagggat
aactttgagaaggcctacctagactccacggagaggttctacaggacccaggcgccgtcc
tacctgcagcagaatggagttcaaaactacatgaaatatgcagacgctaaattaagagaa
gaggagaaacgtgcactacgatatttagagacaaggcgtgaatgtaactctgtacaagca
cttatggaatgttgtgtgaatgcactggtaacatcttttaaagaaacgatcttggctgaa
tgtccaggcatgatcaaacggaacgagactgacaagctgcacctcatgttctctctcatg
gataaagtgcccaatgggattgaacccatgctgaaagacctggaggaacacatcgtcagt
gctggactggcagacatggtggctgctgccgagaccatcacaactgactcagagaagtat
gtggagcagctcctgactctgttcaatcgatttagtaaattagtaaaggaagcgttccag
gatgatcctcggttcctgacagccagagacaaagcatacaaagcagttgtgaatgatgcc
acgatatttaagttggagctgccaatgaaacagaagggagtgggcctaaaaacacagcca
gagtcaaagtgtccggagctgctcgctaactattgtgacatgctgctacgaaagacgcca
ctcagcaaaaagctgacctcagaggagattgagctcaagctgaaggaagtgctacttgtg
ctaaaatacgtccagaataaggatgttttcatgaggtaccacaaagcccacctgaccaga
cgtttgatcctggacatctcagcggatagtgagattgaggagaacatggtcgagtggctc
agggaagttgggatgcctgctgactatgtgaacaagctagctagaatgttccaggacatc
aaagtgtctgaagatcttaaccaggttttcaaggaaatgcacaaacacaacaagctggct
ttaccagcggactctgtgaacataaagatcttgaatgctggagcgtggtcacgcagttca
gagaaagtgtttgtgtctctgcccaccgagctggaagacctcattcctgaggtggaggat
ttctacaagaagaaccacagcggccgcaaactccactggcaccacctcatgtccaatggc
attatcactttcaaaaatgaagtagggcagtacgacctggaggtcacaacctttcagctg
gctgtacttttcgcctggaaccaaagaccacgagagaaaatcagctttgagaatctgaaa
cttgccactgagctgcctgatgctgaactgagacgaactctctggtctcttgttgccttc
ccaaagctcaaacgccaagtgctgttatatgaacctcaagtgagctctcccaaagacttc
acagacagtacattgtttttcgttaaccaggaattctccttgataaaaaacgccaaggtt
caaaaaagggggaaaataaacctaatcggccgattgcagctgacgacagagcgaatgaga
gaagaggagaacgaaggcatcgtccagcttagaatattaagaacacaggaggccatcatt
cagatcatgaagatgcgtaagaagatcacaaacgctcagctgcagaccgagctggtggag
atcctcaagaacatgttcctcccccaaaagaaaatgatcaaggaacagatcgagtggctc
attgagcacaagtacatcaagagagacgaaacggacattaacaccttcatctacatggcg
taa

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