Garra rufa (doctor fish): 141284344
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Entry
141284344 CDS
T11039
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b
KO
K06781
cell adhesion molecule 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141284344 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141284344 (cadm1b)
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
Nectin family
141284344 (cadm1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
FAS_meander
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
141284344
NCBI-ProteinID:
XP_073673447
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All DBs
Position
14:complement(25016095..25135301)
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AA seq
371 aa
AA seq
DB search
MVQGQNLVTNNVSVVEGETAIISCRVKNNDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLV
NFSDNELLVSLSNVSLSDEGRYVCQLYTDPPQEAYADITVLVPPGNPILESREEIVSEGN
ETEITCTAMGSKPASTIKWMKGDQPLQGEATVEELYDRMFTVTSRLRLTVSKEDDGVAVI
CIIDHPAVKDFQAQKYLEVQYKPEVQIVVEFPEGLTREGENLELTCKAKGKPQPHQINWL
KVDDDFPSHAVITGSDLFIENLNKSYNGTYRCVASNLVGEAYDDYILYVYDSRADGAPQK
IDHAVIGGIVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGH
NNSDDKKEYYI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagggtcagaacctggtgacgaataatgtctcagtcgtcgagggcgagacggcc
atcatcagctgccgggtgaaaaacaacgacgactccgtcatccaactgctcaaccccaac
cgacagaccatctacttcagagacgttagacccttgaaggacagtcggtttcagctggtt
aacttctccgacaacgagctgctggtgtcgttgtccaacgtgtcgctgtcggacgagggc
cggtacgtgtgccagctctacacggatccccctcaagaagcctacgcagacatcactgtg
ctggttccaccaggcaacccaatcttagagtcccgcgaggaaatcgtgagcgaggggaat
gagaccgagataacctgcaccgccatgggcagcaaacctgcttccaccatcaaatggatg
aaaggagaccaaccactgcaaggtgaggcgactgtcgaggagttatacgacaggatgttc
actgtcaccagccggctcaggctcaccgtctctaaggaggacgatggagtggccgtcatc
tgcatcattgaccacccagccgtgaaggacttccaggcccagaaatacctggaagtgcag
tataaaccagaagtgcagattgtggtggaattccctgagggtttgaccagagaaggggaa
aatctcgagctgacatgcaaagctaaaggaaaaccgcagcctcatcaaattaactggctc
aaagtggatgatgatttcccctcccacgccgtgattactggctctgatctcttcatcgaa
aaccttaacaagtcctacaacggaacgtaccgctgtgtggcatctaacttagtgggagaa
gcctatgatgattacatcctttatgtatacgattcaagagcagatggagcgccacagaaa
attgatcacgccgtcattggaggcatcgtcgcggtggttgtgttcgccatgctttgtctc
ctgattgttctcggacgatatttcgcaagacacaaaggtacctactttacccacgaagcc
aaaggagcggacgacgccgcggatgccgacactgccatcatcaacgcagagggtggacac
aacaattcggatgacaagaaggagtactacatttaa
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