Garra rufa (doctor fish): 141284377
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Entry
141284377 CDS
T11039
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141284377 (npas1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
141284377 (npas1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
141284377
NCBI-ProteinID:
XP_073673470
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Position
14:31733214..31763217
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AA seq
723 aa
AA seq
DB search
MRADHCPSIRQYGSCQACPIARLHHSQTLWEDPQCLDEGGLLNYSIVNMHVTPKDEQAAL
CVPTLRRTSHSLVTDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVEL
TGSSVFDYIHPADHVEMAERLGIRPHLRAEAGCQTSHESASSSASTSSLAGTPEPAPSSP
CSPVRELSERGFFIRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSSRTLHRPMG
LVALAHTLPPSTLNEVRMESHMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGHTCYHFI
HAEDLDTIRQSHEDLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVN
YVLSRPELADMPLDLLQLPESLRAERLQASSSPRDTSPKAQGSTGTQPLKGRTETDHKGK
EAFSHTAASQSENARKRSHHSDAESGPPEVRRRVEVFRQREDSPCTSSDQASDSEVEDDD
ERESEWDHIPTSKRVKSEEGPLKQGNGANGTGKIHNGRAVIQHLKSVVTSSGSNIKTEQE
VMGTSVGASSGRRWSQAQPSSGGTNGSSPPSQPQNSTPTEAPSKGLFNPPSPTLSSPISA
SSLPRDDRSIHGGRAPDFELLQRLTASGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPPE
MPTAHAEVHRSDHVAKTPAFFPHLQRIASLPPFSGFSPAEPTFPPTLPFCMNGLRGTAGT
DED
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgaccattgtccatccatcaggcagtatggctcctgtcaggcctgccctata
gctagactgcatcactcacagactctgtgggaagaccctcagtgtttagatgaggggggg
ttgctaaactattcaatcgtcaacatgcatgtgacccccaaagacgaacaagcagcgctc
tgtgtacccacactgcgaagaacaagtcattcgctggtcactgacatattcgaacagcac
ctgggagctcatctactacagtctctggatggattcgtgttcgtggtcagtcaggaagga
cgatttctgtatatctcagagactgtgtccatctaccttggcctttcacaggttgagttg
actggcagtagcgtgttcgattacatccaccctgcggatcatgttgagatggcagagcgt
cttggcattaggccacacctccgggcagaggcaggctgtcaaacgtcccatgagagcgct
tcaagctccgcctccacatcctcactggccggcactccagaaccagcaccatctagtccc
tgttctccagtccgtgagttatcagaacgtggcttcttcatcaggatgaaatccaccctc
actaagcgtggcctccacgttaaatcctcgggctataaagtgattcatgtgacaggtcgg
attcggtgtcgaccagccctggtgccaggctcctcccgcaccctgcatcggccaatggga
ttggttgctttggctcacacacttccaccctccacgctcaatgaagtgcgcatggaaagt
cacatgtttgtcttcagagtcaacatggacctgcaggtcacctactgtgagaacaggatt
tcagagtatatggacctgagcccagctgaggtagttggacatacctgctatcacttcatc
catgcagaagacctggacaccatcaggcagagccatgaagatttgctgcggaaagggcag
gttgtgacggggtattatcgctggctgcagaggagaggagggtatctgtggattcagtcg
tgtgccaccgtgtccattaaccacaaagcgccccatgagcgtaacgtcatctgggtcaac
tatgtgctcagtcgaccagagctggcagacatgcctctggacttattacaactcccagaa
agcctgagggcagagcggcttcaagcaagctcctccccacgcgacacttctccaaaggca
caaggctccacggggacacagccattgaaaggcaggaccgaaacagaccacaaaggaaag
gaagccttctcgcacactgctgcgagccaatcagagaacgccaggaagagatcgcaccat
tctgatgctgaaagtggtcctcctgaggtgaggaggcgggtggaggttttccggcaaaga
gaggacagcccatgtacctcctcggaccaagccagtgacagcgaggtggaagatgatgat
gagagagaaagcgagtgggaccacatccccaccagcaaacgggtgaagagtgaagagggg
ccattgaaacaaggcaacggggcaaatggaacaggtaagatccacaacggccgtgcagtg
atccagcatcttaagagtgtggtgaccagttccgggtcaaatattaagactgaacaagaa
gtgatgggaacaagtgtaggcgcaagttctgggaggcgctggagccaagctcagcccagc
agtggaggaaccaatggcagcagtccaccttcccaacctcaaaactccaccccaacagaa
gctccatccaagggtctgtttaacccaccctccccaaccctgtcgtcacccatctctgcc
tcgtccctgcccagggatgatcggtccatccatggaggccgtgctcctgacttcgaacta
ctgcagagactaactgcaagtggggctgcaggacgtgtgctctttcaccccctggctctc
ggcccacaggggcctcagagtctctacgctcccagcactattcgctacgccccacctgag
atgcctacagctcacgccgaagtgcaccgctcagaccatgtggctaaaactcccgctttc
tttcctcacctgcaaaggatcgcatctctgcctcccttcagtggcttttctccagctgaa
cccacttttcctccaactctgcccttctgtatgaacggactaagggggacagcagggaca
gatgaggattga
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