KEGG   Garra rufa (doctor fish): 141284392
Entry
141284392         CDS       T11039                                 
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03440  Homologous recombination
grf04068  FoxO signaling pathway
grf04110  Cell cycle
grf04115  p53 signaling pathway
grf04210  Apoptosis
grf04218  Cellular senescence
Brite
Enzymes [BR:grf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     141284392 (atm)
Protein kinases [BR:grf01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   141284392 (atm)
DNA replication proteins [BR:grf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    141284392 (atm)
Chromosome and associated proteins [BR:grf03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    141284392 (atm)
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    141284392 (atm)
SSDB
Motif
Pfam: PI3_PI4_kinase FAT TAN FATC HEAT_ATR CEP104-like_TOG
Other DBs
NCBI-GeneID: 141284392
NCBI-ProteinID: XP_073673481
LinkDB
Position
14:34962837..35034734
AA seq 3029 aa
MSLALHELLTCCRGLENEKATERKKEVDRFRRLIRSPDTVEELDRMSACKGSKQLTWDAV
FRFLQKFLQKETESLQSGKANVSATTQANRQKKMQEISSLMKYFIRCANQRGPKLKCAEL
ISHVVEVLQNPFSCVAYGEDYSSLLLKNILSVRKYWCEMSQQQWHSLLDLYCGLFIKGSK
SINRVQVSRIIHTVVWGCCVQIEGLSHTLFNFFLKALKRYQPDGQLMIVENLVSAVNVFL
HSVLLSSRKRVCSLGEDVLSSMVRVYTEMRPSPVLKEELVKFFHLQLCVHHPKGAKTLET
GACAEDWIRWQGQLCTLYDALVSEISQLGSRGKYATGSRHIAVKENLIELTADVCHQLFS
QSTHISEVTTSFCRDTQRDSPQSCKRRRIEPPLINWEVIRSKLQPHHSDFDMIPWLQVTA
ALISKYPSILPVDDLMPLLGLLCQLQGEQQRRGERGPYVLHCLREVALCHAKSSANCSVH
AAEVGRLWGRVWALALRGVGSAQTGGLCLELLHVMVQESLVPVDREFWKVFSGAVCKPSL
VGALCLAQALLKCSIPKSVYSQDLSSGVLMEMGGEPPTLRDSIISWLVMNEQNEETEENS
KPHLIITRDFPLNLIPRVLVSLTLKDSRAGLAFLMGSLKPESFCPQSSSFAEGTVKDNLE
EIENLFLQFSFDDTNSSTGATTDKENVYSEKPQFTVIPALRSKLEHSLLSVAEQLFNCYS
PDSSSTPHECVLRCVSLLSGVLAAYVCIGLITEEQACHSPLFLKAKALVHEFSHYVSMAK
SKLAENDTIREIQSVMLLCSESISRREKEDNISTISRNLFMKTLPVRLLNDLCDISKQLL
SNSSKEDNSVVETDPMDEDMDMSRTQTDNQKDIDLFEDGDGTHHNTFRPRQSNEEASDSK
YIAGTKSALSEEHLSKQDLAFLSVLGFLSLCASSELNGGFSFKPLDTQRKLLKLLDLIDF
SQMLHLHTYLSLLKKLPAEVTSLDPEEFDTLLRPLADVCSLYRQDQEVCAAILCSLLPSI
RCLGRTPPVSEQEDEMAHIKGALLKVISGFCILGKSGKCTSSVRLALRQCLLALEDILKN
MDNQRKNCPSEDVPDETFNRRAVLLKCVSMVMSCSPVCEKQALFALFQSYKENGIDEQLI
KKVLRGVCQSLGYRDSKSLINSHIYYLVAEWLNQKQSDSSYTLQSFPYTLLDCPSLEEFY
RSSYHVLIPHLVFLNDFEEVKSIGDRLAPDWKQLLANCFPKIMVNILPHFALAGQDTHVA
QQREKAHRVYDILKNSNCLGKQQIDNLIRNNLADIVVELLMTLHETAGGTAADRGDLQKF
TGELDPAPNPPFFSSYVIKATLDYLSKCHSANHKSLVAILSKTPMSIQKILIAICQKAAE
TTNSYERHRILMMYHLFVSLLLREVKDGLGGAWAFVLRDIIYTIIHHINSRSSQQDEVAT
RSLSLCCDLLSLVCQTAVKYCDDALESHLQVIVGTLTAQVTEQSAISQQVLSLLRFLIIE
NPENSMLRKSIPLLEPFPDRSHFRELRAAQHALKYSSGAFTLRQEIEHFLSVTSCDSLPL
ARLEGLKDLKRQLHSHKQQIGQLLKECHGDPENCILVKLVLNLLQLCKIAANHPGGGDIL
KAAGRCLGELGPVDLSSIALHHGKDQLYAKAADLFHDVPFQWIFIILNCMDNALTHHSIG
VRQAAGTCLKDILATQCGIEFGEMYKSKRDPLLAYLNPFRSAKRRDTVVSMEVTSESRHK
LDSSDLWLVQPGGHKDWLKNLCMALLDSGAVRNEALLLTKPLCEVNTDFCQRMLPLFVHD
ILLGDVDGSWRQLLSTHIQSFFSQCRRPSTPSSRPTTPMLSDSGNTIDVGNQCQIDKTSL
RSMLAVIDYLRQQSRPVAPGSNEYGTVCDSNFWLDLNYLEVAGAAQICSAHFTALLYSEI
YVDKIRSNMEQSRRSQSRASRRITFEESSQTLSISSVNEKSLEDSGISLQDLLIEVYRCI
GEPDSLYGCGGGKLFSPLTRIRIYEHEAMWDKALVSYDLHSNMPEVTRQIGIVEGLQNFG
LCNILNTYLHGLEKEGAEWGPELRELRFQAAWRNTQWDCDLPERNEKLMPGINESLFNAL
QALRDREFSLFEQTLNHARGHEVEESCRGSLEAVSSLYPALCNLQRISELQSVEELFSRP
VTDTSLNEVYRKWQQHSDLLTDSDFSLVEPVLALRSSIQETLISSETDQDQRNYLISVYS
SHLMELCKLARSAGNTQLAERAVFHMKQHSLISGGGGGSSSWAWQLEEAQVFWVKKEHGL
ALGLLKQMIHKLEDLVCVNPAVVPVYSECLRLCGNWLAESCLESPAVILEKYLEMAVEVI
EDHSSDSNAKLQSQKTQAFFSLARFSDAQYQSIENYMKSSEFENKHALLEKAKEEVDLMR
ERKVSNNRYTVKVQRELELDVKALANLQADRNRFLLKAVENYIQCLELGEEHDTWVFRLA
SLWLENADVKTVNDMMRSGVKKIPSYKFLPLMYQLAARMGTKVSSSLTSQEVGFHHVLNE
LICQSSLDHPHHTLFIILALVNANKDESFSRSRSSKSSARQPSPLDLERAEVARKIIDVV
RKKRAKMVKDIESLCNAYITLAYMDASRHKTEKKAIPIPPEQPIMQIKDLDDVIIPTMDI
KVDPSGRYEDLVTIRSFKPHFHLAGGVNLPKIIDCVGSDGKSRRQLVKGQDDLRQDAVMQ
QVFHMCSTLLQRNAETRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDSQKGAHK
RFRPQDWPNMSCRKKMMEAQRLEFDGKLQAFTEVCQNFRPVFRYFCMERFLDPAVWLERR
LAYTRSVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFR
LSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKAFY
LQQHDEHAEPNATLNPTPGGDEIDAHRKASDSQSFNKVAERVLLRLQEKLKGVEEGTVLS
VGGQVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq 9090 nt   +upstreamnt  +downstreamnt
atgagtctggcgctgcatgagctgctaacgtgctgccgaggacttgaaaatgagaaagcc
acagagagaaagaaagaggtggatcgcttcaggagactcatccgttcgccagacacggtg
gaggaacttgatcgtatgtcagcatgcaaaggctccaagcagctcacctgggatgctgtt
ttccggtttttacagaagtttcttcagaaagagacagaaagtctacagtcaggaaaagcc
aacgtttccgccaccacgcaagccaacagacagaaaaagatgcaggaaatcagcagcctg
atgaagtatttcatcagatgcgccaaccaacgtggtccaaagttaaagtgtgcagagctg
atttctcacgtggtggaggttttacagaatccgttcagctgtgtggcgtacggcgaggac
tacagtagtcttctgctaaagaacatcctgtctgtccgtaaatactggtgtgagatgagc
cagcagcagtggcacagtttgttagatttgtactgtgggctgttcattaagggatccaag
tcaatcaacagagtccaagtgagtcgcatcatccacactgtcgtttggggctgttgtgtc
caaatagaaggattatcccacactctctttaacttcttcctgaaggctctgaaaaggtat
cagccagatggacagttgatgattgtggagaacctggtatctgctgtaaacgtttttctg
cactcagtgcttttgtccagcagaaagagggtgtgtagtttgggtgaggatgttctgtcg
tctatggtgcgtgtatatactgagatgagacccagcccggtgctgaaagaggagctagtg
aagtttttccatctccagctttgtgttcatcaccccaaaggggcaaagactcttgagaca
ggtgcttgtgcagaagactggatcagatggcagggtcagctctgcaccctctatgatgct
cttgttagtgagatcagtcagctcggcagcagagggaaatatgccaccggctctcgtcat
atagctgtgaaagaaaatctcattgaactgacagctgatgtctgccatcagttgttcagt
caaagcactcatatttcggaagtgacaacatctttctgtcgggatactcagcgggatagt
ccgcagagctgcaaacgcagacgaattgagccaccgctgataaattgggaggtgatacga
tccaaactgcagccccaccacagcgactttgacatgattccctggttacaggtcacagct
gctctgatatccaaatacccatcgatcttgcctgttgatgatcttatgcctctgctcggg
ttgctctgccagcttcagggtgaacagcagcgtcgaggcgagagggggccatacgtcctg
cactgcctgagggaggtggcgctctgccatgccaagagctcagcgaactgctctgttcat
gcagctgaggtgggccgtctttggggcagagtttgggctctggctctgcgtggagttggc
tcagcccagaccgggggtttgtgtctggagctgttgcatgtcatggtgcaagaatctctg
gtgcctgttgatagagagttctggaaagtcttctctggtgctgtttgcaagccctctctc
gttggtgccctctgcttggcccaggccttgttgaagtgctctatccctaaaagtgtttac
agtcaagacctctccagtggagtgctgatggagatgggtggagagccgcccactctgaga
gactcgatcatcagctggctggtcatgaacgaacagaatgaggagacagaggagaacagc
aaacctcacctcattatcaccagggattttccactgaacctcattcctagagttttggtg
tctttgacactgaaagacagcagggcaggactggcatttctgatgggcagcctgaagcca
gagagtttctgtccgcagagttcttccttcgctgaggggacagtgaaagacaatttggag
gagattgagaatctcttccttcagttcagttttgatgacacaaactccagtactggcgct
acaactgacaaagagaatgtttattcagagaaaccacagtttactgttattccagctctc
agaagcaaattagagcacagtcttctgtctgtcgctgagcagctgtttaactgctactct
cctgatagttcaagcactccccatgagtgtgtgttgcgctgtgtttcgttgctcagtgga
gttctggctgcttacgtgtgtatcgggctcatcacagaagaacaggcctgtcactctccc
ctcttcctaaaagccaaggcattggttcatgaatttagtcattatgtatcaatggctaaa
agcaaactagctgagaatgataccatcagagaaattcagtcagtgatgttgttgtgctct
gaaagtattagcagaagagaaaaggaggacaacatttccaccatttctcgcaatttattc
atgaagactttgcctgtgaggttgctaaatgacctgtgtgacatatctaaacaactgtta
agcaactcaagtaaagaggacaactcggtcgtggagaccgacccaatggatgaagatatg
gatatgagtagaacccaaacggacaaccagaaggatattgatctgtttgaagatggagac
gggacacaccacaacactttcagacctcgccagtctaatgaagaagcgagtgattcaaag
tacatagcagggaccaagagtgcattatctgaggaacatttatccaaacaagacttggcc
ttcctgtctgtgcttggtttcctgtcactgtgtgcatcttcagaactcaatggtggattc
tcctttaaacctctggacacccaacgcaaactgctcaaactattggacctcatagacttc
tctcagatgcttcaccttcacacgtatctttcattgctgaagaaactcccagcagaagtc
acatctctggatcctgaagaatttgatactctcctcaggcctctggcagatgtttgttct
ctatatcggcaagaccaggaggtgtgtgctgccatcctgtgctctcttctgccatccatc
cgctgtctgggccgcactccacctgtgagcgagcaggaagatgagatggcacatatcaaa
ggagctctgctcaaagtcatatcaggattctgcatcttgggtaaatctggcaaatgtact
tcatctgtgaggctggcactaaggcagtgtttactggctttagaagatattttgaagaat
atggataatcaaagaaaaaactgtccttcagaagacgtacctgacgagacctttaatcga
cgggctgtcttgctgaaatgtgtctccatggtgatgtcctgcagccctgtgtgtgagaag
caagccctgtttgcactttttcagtcctacaaggagaatggcatagatgaacagctaatc
aaaaaggtgctgagaggtgtttgccagtcgcttgggtacagggactcgaagagtttaatt
aattcacacatatattatctagtggccgagtggctgaaccaaaaacagtctgattcaagt
tacacattacagtccttcccctacacactgctggactgccccagtctggaggagttttat
aggtcatcttaccatgtgctgatcccacacctggttttcctgaatgattttgaagaggtg
aaatccattggcgatcgcttggctccggactggaagcagctgctggctaattgctttccc
aagatcatggtcaacatcctgcctcacttcgctctcgccgggcaagacacccatgtggcc
cagcagagagagaaagctcacagggtgtatgatatactgaaaaacagcaactgtctggga
aaacagcaaattgacaatttgattcgcaataacctggctgatattgtggtggaactgtta
atgacactgcatgagacagcaggaggaacggcagcagatagaggcgacctacagaaattt
actggagagttggatcctgcaccaaacccaccgttcttcagctcatatgtcatcaaagcc
acgctggactacctgagcaaatgccacagtgccaatcacaagtctctggttgccatcctg
tccaagactcctatgtccattcagaagattctcatagcaatctgccagaaggctgcagag
accaccaacagctacgagaggcaccgcatactgatgatgtaccacttatttgtcagtctg
ctgctcagggaggtgaaggacgggctgggcggagcctgggcgtttgtgctgcgtgacatc
atctatacaatcattcaccacatcaacagcagatcatctcagcaggatgaggtggccact
cggagtctctccctttgttgtgacttgctgtcgctggtctgtcagacggctgttaaatac
tgtgatgatgctctagagagccacctgcaggttattgttggtactctcacagcacaggtc
actgaacagtctgccatatctcagcaggtcctcagtctactaaggttcctgataattgaa
aacccggaaaacagcatgttgagaaagtccataccccttttggagccttttcctgaccga
tcacactttagagagctgagagccgcccaacacgctctcaaatacagctcaggagccttc
actctcagacaggaaattgagcattttctatccgtaacgtcttgtgattctttgcccttg
gcccgtctggagggattgaaagatctaaaaaggcaacttcacagccataaacagcaaata
ggacaactcttaaaagaatgccatggtgatcctgaaaactgtattttggttaagctagtt
ctaaaccttcttcagctttgcaaaatcgcagctaaccaccctggtggaggagacatcttg
aaggctgctggccggtgcctaggagaacttgggccagttgacttatcatccattgccttg
caccatgggaaggaccagctgtatgctaaagcagccgatttgttccacgatgttcctttt
cagtggatctttatcatcctgaactgcatggacaatgcactcacacatcacagtattgga
gtgcgtcaggctgctggcacatgtctaaaggacatcttggccactcagtgtgggattgaa
ttcggagagatgtataaaagcaaaagggaccctttgctggcatacctaaacccatttcgg
tctgccaagagacgggacactgttgtgagcatggaagtgacctcagagtccagacataag
ctggacagttctgacctctggttagtacagcctggtggacacaaggactggttaaagaac
ctgtgtatggccttgttagacagtggagctgtccgaaatgaggctctgcttctcaccaag
cctttatgcgaggtaaatacagatttctgccagaggatgctaccactctttgttcatgat
atccttctgggagatgttgatggttcctggaggcagctgttatccacacacatccagagt
ttcttcagtcagtgccgcagaccctccacacccagcagccgccccactacccccatgctc
tccgattcagggaacactattgatgttggcaaccagtgccagatagacaaaacctcactc
cgcagcatgctggcagtcatagactatctcaggcaacagagccgcccagtggcacctgga
agtaatgaatatgggacagtgtgtgattcaaatttttggctggatctgaattatctggag
gtggctggagccgcccagatttgttctgcccatttcactgctctcctgtattctgagatc
tacgtagacaagatcagatccaacatggagcagagccgaaggtcacagtctcgagcgtcg
agacggatcacgtttgaggagagtagccagacactgtccatcagtagcgtcaatgaaaag
agtttagaagactctggtatcagtctccaggatcttctgattgaagtgtacagatgcatt
ggagaacccgacagcctgtatggatgtggaggaggcaagttattcagtcctctgacaaga
attcgaatatatgaacatgaggccatgtgggacaaggctttggtttcatacgacctccac
tccaacatgccagaggtcacgcggcagatcggcatagtagagggtctgcagaactttggt
ttgtgtaatattttaaacacgtatcttcacgggctggagaaagagggggcggagtggggt
cctgaacttagagagctacgatttcaggcagcttggaggaacacacagtgggactgtgac
ctgcctgagagaaatgagaagctgatgcctggcatcaatgagtccttgttcaatgccctt
caagctttgagagatagagaattctctctgtttgagcaaaccctcaaccacgccagaggt
catgaggttgaggagtcttgtcgaggtagtctggaggccgtgtcttcactctatcctgct
ctctgcaacctgcagaggattagtgaactccagagtgtcgaggagcttttctccaggcct
gtaactgacaccagccttaatgaagtgtacaggaagtggcaacagcactcagatctccta
actgacagtgatttcagcctggtcgagcccgtcttagccctgcgctcctccatacaggaa
acattgatttcctcagagacagaccaagaccagaggaactacctgatttctgtctattcc
tctcacctgatggagctttgcaaactggctcgctctgcaggcaacacacagctagcagag
cgagcagttttccacatgaaacagcacagcctgataagtggtggtggtggtggcagcagc
tcatgggcctggcagctggaggaggcgcaggtgttctgggtgaagaaggagcacgggctg
gctctggggctactcaaacagatgatccataaactagaggatctggtgtgtgtgaaccct
gctgtggtgccggtgtattctgagtgtttgagactgtgtggaaactggctggctgaatcc
tgtctggagagccctgctgtcatattggagaaatatctggagatggctgtggaggtcatt
gaggaccacagtagcgattcaaatgctaaacttcagagtcagaagacgcaagctttcttt
tcgcttgcccgtttctctgatgcacagtaccagagcattgaaaactacatgaagtcatca
gagtttgagaacaagcacgctcttctggaaaaggccaaggaggaagttgaccttatgcgg
gagaggaaagtcagcaacaacagatacacagtgaaagttcagagagaactagagctggac
gtcaaggcactagctaacctgcaggccgaccgcaaccgcttcctcctcaaagctgtggag
aactacattcaatgcctggaactgggagaggaacatgacacctgggtcttcagactggcc
tccctctggctggagaatgctgatgtcaaaaccgtaaatgacatgatgaggagtggtgta
aagaaaatcccgtcatataagttcctgcccctgatgtatcagttagctgctcgaatgggc
accaaagtgtccagctccctgacctctcaggaagtgggcttccatcatgttctgaatgag
ttgatctgtcagtcatcgcttgaccacccccaccacactctcttcatcatcttggcactg
gtcaatgctaacaaggatgagagtttctcacgcagtcgttcgtccaagagcagtgcacgc
caaccttcacctctggacctggaacgagctgaagtcgctcgtaagattattgacgtggtt
cgtaaaaagagagccaagatggtcaaagacattgagagtctttgcaatgcctacatcact
ttggcttacatggacgccagtcgccataaaactgaaaagaaagccatacctattccacct
gaacaacccattatgcaaatcaaagaccttgatgatgtcatcattcccaccatggacatc
aaggtggatccatcaggcagatatgaagaccttgtgactatcaggtcattcaaacctcac
tttcacctggctggaggcgtcaacctacccaaaataattgactgtgtgggttcagatggc
aagagcaggagacagctagtcaagggtcaggacgatctgaggcaggacgcagtcatgcag
caggtctttcatatgtgctccaccctcctgcagcgcaatgcagaaacacgcaaaaggaaa
ctcaacatccgccgttacaaggtggtgccgttttcccagcgcagtggtgttttggagtgg
tgttctggtactgtgcccattggagagtttctggtcgactcacagaagggggcgcacaaa
cgcttccgcccacaagactggcccaacatgtcctgccgaaagaaaatgatggaggctcaa
cggctggaatttgatggcaaactccaggctttcactgaggtgtgccagaacttccggcca
gtattccgatatttttgcatggagcgcttcctggaccccgctgtgtggctggagagacgg
ctagcatacactcgcagtgtggccacctcttctattgttggttacatcgttggcctgggc
gatcggcacattcagaacattcttattgatgaacagactgccgaactagtccacatagac
ctgggtgttgcgtttgagcagggcaaaatcttacccacccctgagacagttcccttcaga
ctatctcgagacattgtggatgggatgggcatcacaggggtggagggcgtcttcaggaga
tgttgtgagaaaacaatggaggttatgaggagttctcaagaagccctgttgaccattgtg
gaggtgttgttgtatgaccctctgtttgattggaccatgaaccctctgaaggctttctac
ctgcagcagcatgacgagcatgcagaacccaatgccacactcaaccccacgccgggtgga
gatgagatcgacgctcaccgcaaggccagtgacagtcagagctttaataaagtggcagag
cgtgtgttactcagactgcaggagaagctgaagggtgttgaggaggggacggtgctcagc
gtgggcggccaggtaaacctcctcattcagcaggcaatggaccccaaaaacctcagccgc
ctcttccccggctggcaggcctgggtctga

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