Garra rufa (doctor fish): 141284542
Help
Entry
141284542 CDS
T11039
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141284542 (dscaml1)
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
Other
141284542 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_5
Ig_6
V-set_CD47
Receptor_2B4
Sp38
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
141284542
NCBI-ProteinID:
XP_073673622
LinkDB
All DBs
Position
14:30406412..30532216
Genome browser
AA seq
1954 aa
AA seq
DB search
MRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSYGALYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVLDPTETPPSVMDSFQSGEVQVGRSIELPCIASGYPNPT
IRWLKDGRPLPADSRWTRRLTGLTISDLRLEDSGNYICEVTNSFGSKEVTGHLNVIEPLR
VTLSPKNLKTGISSTVILSCAVQGSPHFTVSWFRNTEPIMPDQHFSIQGAHNETLFITAA
QKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVSSFSERVVAPGEPFSLMCAAKGAPP
PTITWTLDDEPVARDSAHRASQYTLSDGSTVSHVNVTNPQIRDGGVYRCAARNSAGSAEY
QARINVRGPPSIRAMRNITAVAGRNTFINCRVIGYPYYSIKWFKDGTTPLPDNHRQVVYE
NGTLKLSDVQKGTDEGAYLCSVLIQPQLSISQTVYVTVKVPPLIQPFDFPPTSIGKLMYI
ACVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKEFMSSLQISKVSLQHNGNYTCIASND
AATVSSERQLIVTVPPGFRVQPNNQDGIYGKSEVLNCSVEGYPPPKVVWKHAKGIGNPQQ
YHPVPLTGRIQILSNGSLLIRHVLEEDRGYYLCQASNGVGSDISKSMMLTVKIPAMITSH
PNTTMAIKGQNKELNCTARGEYPIIIRWERGDTVIDPDRNPRYSITTSPNEKSDEVISTL
KLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKDRSMNLRWTQRFD
GNSIITSYDIEYKNKSDPWELKHATRKISPTNNQANIVELHPASVYSIRMYSYNKIGRSQ
ASKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWKAPKKELQNGVIRGYQIGYRENGPG
SNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQ
PPQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYRVVFWSLYPDGGGCCGGQTLGLNQKW
GEMQNITTTREQVELKGLEKFTNYSIQVLAYTQAGDGVRSNVLYIQTREDHPGPPAGIKA
VPSSASSVVVSWLPPIKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELLIYRITHLTRGQ
QYLIWAAAVTTAGRGNISEKVTVEPAGKAPAKILSFGGTVTTPWMKEVRLPCSSVGEPTP
TIKWTKDSEDTAIPVTQDGHRNILSNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNLL
VQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFISSSERS
FKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPLFTHINSTHARLN
LQGWTSGGCPITAVLLEFRPKGTWAWQSVRTNASADIFLAELREATWYELKMKACNSAGC
GNQSSQFATLDYDGSTIPPIKSARGEGDDVKKLFSIGCPVILVTLGMALLFIIRKKRKEK
RLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGED
KATIPVTDTEFSQSVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAH
STRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSM
VSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNADSMTSM
STPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEYCNLPLYMKTDPFFRKQAELH
DPCPVVPPREASIRSLAARAYHTQGRHMTLDPSKQQALTLGHGGLSSLTSSGASGTSGPA
SSGAAGSSSISSGTATLPQRTLTMPSTSSTSSAPSGAVAAGAGASASSTGGSGPTPGSSK
VGGSRDSLLESSSSGLGRLQKQNAGAYSKSYTLV
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcaacgtggccgtcttcaagtgcctcatcccctctgctgtgcaggagtacgtc
agtgtggtgtcctgggagaaggacactgtctccatcgtcccaggtaacaggtttttcctg
acgtcatatggggccctctacatatctgatgttcagaaagaggacgccctgtctacctac
cgctgcatcaccaagcacaaatacagcggagaaaccaggcagagcaatggggctcgtctc
tctgtgctggaccccactgaaaccccaccttctgtgatggacagtttccagtcaggagaa
gtacaagtagggcgaagcatagagttgccctgtatcgcctccggttatcccaaccccacc
atccgctggctgaaagatgggaggccgcttcctgctgactcccgctggacacggcgactg
accggcctcacaatcagcgacctccgtctggaagactctggaaactacatctgtgaagtc
accaacagctttggctccaaagaggtcacaggacaccttaatgtcatcgagcctctgaga
gtcacgttatcccccaagaacctgaaaacaggcatcagcagcacagtgattctctcctgt
gccgttcagggctcaccccacttcaccgtctcctggttccgcaacacagaacccatcatg
cctgaccagcacttctccatccagggagcccacaacgaaactctattcatcacagcagcc
caaaaaagacactcaggggcatatcagtgctttgccacccgcaagggtcagaccgcacag
gacttctccatcatactgcttgaggacggcaccccacggatcgtctcgtctttcagtgag
cgcgtagtagcccctggcgagcccttctctctcatgtgtgcggccaaaggtgctccaccc
cccaccatcacctggacattggacgacgagccggtagcgcgggactcggcgcaccgggcc
agccagtacacgctctccgacggctccactgtctcgcacgtcaacgtcaccaacccccag
atccgcgacgggggcgtgtaccgctgcgccgcacgcaactcggccggtagcgccgagtac
caagcgcgcataaacgtaagaggtcctcccagtatcagggccatgcggaatatcacagcc
gtggccggtcgcaacactttcattaactgtcgtgtgattggctacccctattattccatc
aagtggtttaaagatgggacaacgccgttgccagacaaccatcgccaggtggtgtatgag
aacggcactctgaagttgagcgatgtacagaagggtacggatgagggggcatatctctgc
agcgtgcttatccaaccccagctctcaattagccagactgtttacgtcacagtcaaagtt
cctcccctcatccagccctttgacttccctcctacctcgattggtaagctgatgtacata
gcttgcgtggtgtcctccggagacatgccaatccggatcacctggaggaaggatggacag
gagattgtgtcaggaacatcaggagtcaccatcgaaaccaaggagttcatgagctccctg
cagatctccaaagtttcgttgcagcataatggaaactacacctgtattgccagcaatgat
gcagcaacagtcagttcagagaggcaactaatagtaacagttccccctggttttcgggtt
cagcccaataaccaagatgggatctacggcaagtcagaagttctgaactgctctgtggaa
gggtaccctcctcccaaagtcgtctggaagcatgccaaaggtatagggaacccccagcag
taccatccagttccactaacgggtcgcatccagatcctgtccaacggttctctgctgatc
cgccatgttttagaggaagaccgaggatactacttgtgtcaggccagcaatggagtagga
tccgacatcagcaagagcatgatgctcactgttaaaattccagctatgatcacatcccac
ccaaacactaccatggccataaaggggcagaacaaggagttaaattgtaccgcccggggc
gagtaccccatcatcatccgctgggagcgaggcgacaccgttattgaccctgaccgcaac
cctcggtactccatcactaccagccccaacgagaaaagtgatgaagttatctccacacta
aagctgaagccagcggagcgaggggattccgtctttttctcctgccacgccatcaactca
tacggcgagggccgagggctcatccagctgacggtgcaagaaccccctgaccccccagag
ttggaggttcgagaggtgaaagatcgcagtatgaacctgaggtggacgcagaggtttgac
ggcaacagcatcatcaccagctacgacatcgagtacaagaacaaatccgacccgtgggag
ctgaaacatgccacccgtaagatctcgcccaccaacaaccaggccaacatagtggagctc
cacccggcgtccgtgtacagcattcgcatgtactcctacaacaagattggacgcagtcaa
gccagcaaagagctgaccatcagcacagaggaagcacctcctgatgggccacccatggat
gtgattttacagccaatgacctctcagagtattcgtgtcacctggaaggcacctaagaaa
gagctccagaatggagtgatccgtggctatcagatcggttatagggagaatggaccgggc
agtaatggacagtacagtatagtggagatgaaagccacaggtgatagtgaggtgtacacg
ctggataacttgaagaagtttgctcaatacggtgtggtggtccaggccttcaaccgagcc
ggaaccggaccctccagctctgagatcaatgccacaacacttgaagatgttcccagccag
ccgccgcagaatgtacgggccatcacggtgacatcggatgaggcggtgatcacgtggtcc
gagcccccacggatgaccctgaatggggttctgaagggctaccgtgtggtgttctggtcc
ctctaccccgatggaggtgggtgctgtgggggccagacacttgggctcaatcagaaatgg
ggagagatgcagaacatcactaccactcgtgagcaggtggagctgaagggcttggagaag
ttcacaaactacagcattcaggtcctggcctacacacaggcaggagatggcgtccgcagc
aacgtactctacatacagaccagagaagaccaccctggccctccagcgggcatcaaagca
gtgccatcctctgccagcagtgtggtggtatcctggcttccccccataaagcccaatggt
atcatccgaaaatacaccatttactgttccagccctggatcgggccaaccggcacccagt
gaatacgaagccaatcctgagctgctgatatacagaatcacccacctcacccgtggtcag
cagtatctgatctgggcggccgccgtcaccactgctggtcgaggaaacatcagcgagaag
gtgactgtggagcctgctgggaaagctcctgctaaaatcctgtctttcggaggaacggtg
accactccgtggatgaaggaagtccggctgccgtgcagctcagtgggagagccaacacca
accatcaaatggaccaaagacagtgaggacaccgccatcccagtcactcaagatggtcac
cgtaatattctttcaaatggtaccctggtgctgcgctctgtaaaagctgaagattctggg
tactatacctgcacagccaccaacacgctggggtttgacacaatcatcgtaaacctgctg
gtacaagtgcctccagatcaaccacgtttgacagtttccaccacatccacttcttcaatc
actctggcttggatccctggagacaacggaggaagttctatcagaggttttgtgctgcag
tattcagtagacaacactgaggagtggaaggacgtctttattagctccagcgaacgctct
ttcaagttggacaacctccgctgtggtacctggtacaaagtcaaacttgcagcaaaaaac
agtgtgggagccggtcgcatcagcgagatcattgaggccaagactcatggcagagaacca
cagttcaataaggaccagcccctctttactcacatcaactccacccacgcccgcctcaac
ctgcagggctggacgagtggcggctgccccattactgctgtcctactagagttccgcccc
aaaggcacctgggcctggcagagcgtgcgcaccaatgcctcagctgacatcttcctcgct
gagctgcgtgaggccacttggtacgagctaaaaatgaaggcgtgcaacagtgccgggtgc
ggaaaccagagctcccagtttgccacgctggactatgacggcagcactattccgcctatt
aagtcagcacgaggggaaggggatgatgttaaaaagcttttctctatcggctgccctgtc
atcctggtcacgttgggcatggcactactcttcattatccgcaagaaacgcaaagaaaag
agactcaagagacttagagatgctaagagcttggctgagatgcttatcagcagtaagaac
aatcgaagttttgacactcctgtgaaaggcccacctcagggaccccgactgcacatagat
atcccccgcgtgcaactactcatcgaggataaagagggaatcaaacagataggtgaagac
aaggccaccatacctgtgacggacactgagttcagccaatcagtgaaccctcagagcttc
tgtacgggtgtgtctgtccatcaccccgccctcatccagaacacgggacctttgattgac
atgtcagacatcaggccgggcaccaatccagtatcaaggaagagtgtgaagtctgcacac
agcacgaggaaccgctattccagccagtggactctgactaaatgccaagcgtccacacct
gctcgtacactcacctcagactggcgaacagtgggctcccagcatggcattacggtcaca
gagagtgacagttacagcgccagcctgtcccaggacacagataagggacgaaacagtatg
gtgtccactgagagtgcgtcttccacgtacgaggagctggcccgagcgtacgaacacgct
aagctggaggagcacctgcagcacgccaagttcgagatcaccgagtgcttcatctctgac
agctcctctgatcagatgaccaccggcaccaacgataacgcggacagcatgacctctatg
agcacaccatccgaaccgggcatctgtcgctttactgcctccccacccaaaccgcaggac
tatgaccgcggcaaaaacgtggcagtgcccattccccaccgcgccaacaagagtgagtac
tgtaacctccccctctacatgaagacggaccctttctttcggaaacaggcggagctgcat
gacccctgccctgtggtcccgccccgcgaggcctcaatccggagccttgccgcccgggcc
taccacacacagggccgccacatgacattagacccctccaagcagcaggccctgacactg
ggccacggtggcctgagcagcctgaccagctcaggggcctctggtacgtcgggcccagct
tcaagtggggctgctgggagctccagcatcagctcaggcacggccaccctgccccagagg
actctcaccatgcccagcacctcctccacctcctcggccccaagtggggcagtcgccgct
ggagcaggagccagcgcgagctccacgggaggcagcggcccgacgcccggcagttccaag
gtcgggggatccagagactctctgctagagagcagctcgtccggcctgggcagactgcaa
aagcagaatgctggggcgtactccaaatcctacactcttgtgtag
DBGET
integrated database retrieval system
