Garra rufa (doctor fish): 141284613
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Entry
141284613 CDS
T11039
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141284613 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141284613 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141284613 (srsf1a)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
SR proteins
141284613 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
GRP
Motif
Other DBs
NCBI-GeneID:
141284613
NCBI-ProteinID:
XP_073673706
LinkDB
All DBs
Position
14:27724752..27733634
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AA seq
260 aa
AA seq
DB search
MSAEMSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFA
FVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGGFGGGGGGGGGGGGGGGGGGGAP
RGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDM
TYAVRKLDNTKFRSHEGETAYIRVRVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSP
RRSRGSPQYSPRHSRSRSRS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaaatgtctggtggggtgatccgcggccctgctggaaacaacgactgccgc
atctatgtggggaatctgcctcctgatatccgcactaaagatgtcgaagatgtgttttac
aagtatggagccattcgagacatcgatctgaaaaaccgacgaggcggtcctccattcgcc
tttgtcgagtttgaagacccaagagatgccgaagatgctgtttatgcccgtgatggctat
gactatgatggctatcgccttcgagtggagtttccgagaagcgggagaggaggttttggc
ggcggcggcggtggtgggggaggtggtggtggtggtggcggcggaggcggcggggctcct
aggggtagatatggacccccatccagacgttcagagtacagagtaattgtttcagggctt
ccaccgagcgggagctggcaggatctgaaggatcacatgcgtgaagcaggtgatgtatgt
tatgctgacgttttccgagatggaactggtgtggtggagtttgtgcgcaaggaagacatg
acctacgctgttcgcaaactggataacacaaaattccggtcgcatgagggagaaacggcg
tacatccgtgtgagggtggacggtccccgcagtccgagctacggaagatcaaggtcaagg
agccgcagtcgcagcaggagtcgcagccgcagcaacaaccgtagccgcagctactcccca
cgccgcagccgaggatccccgcaatactccccgcgccatagccgttcccgctctcgctcc
taa
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