Garra rufa (doctor fish): 141284659
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Entry
141284659 CDS
T11039
Symbol
med13b
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141284659 (med13b)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
141284659 (med13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
141284659
NCBI-ProteinID:
XP_073673752
LinkDB
All DBs
Position
14:24249459..24296461
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AA seq
2106 aa
AA seq
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MMSSCFVPNGASLEDCHSNLFCLADLTGIKWKCFVWQGPTSSPILFPVTEEDPILCSFSR
CLKADVLSVWRRHQTPGRRELWIFWWGDDPNFAELVHHDLSCNEDGSWDSGLSYECRTLL
FKAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFVHGDSNVCTSVD
INQHQPVYLLSEEHLTLAQQSSSSVQVILSPYGLSGTLTGQSFKLSDPPTQKLIEEWKQF
YPIGPNTKEVADDKMDDLDWEDDSLAAVEVVVAGVRMVYPANLVLVAQSDIPVMATVSSS
TSSGSYSGGQHSHMIHGDTGISSVTLTPPTSPEEAQAVSQPAQKWVKLSAMSGAFNVDSS
SHHGGKIPRRLARQMGERVWQECNINRAQNKRKFSTMSNGVCEEETDKASVWDFVESSQR
SQCSCSRLKNQKQRACSTPGHPPSAGQPPQPSTKHKMAEKLEKGDKQQKRPQTPFHHRSS
LCEEQPNLEQGDAVHRLCLQSHEDSRYPSLHHADVTSNKTPMMHSSTDEMAGSPQPPPLS
PHPCERGEETADGLKTSSSPLHQHFYPPSSEPCLVPQKPPDDSLLDPLPLPCPPPYPESL
EATVYVGSAINPNEDTTHNPWKYFRVPGGRNTDFHTPQLPVVTLFEDGNRAGGQDGVVSV
TEFMSSSKRPLKVSEELVKMYEQKKNQHLSAAVCDGDQERESDPYAFVEGDEEFTFSDKD
KKPGTEREAGKKNKRDDGSSASSDDAQGSGGSKPLPTTSLFHETDLVVSINDLDNLFNSD
EDDLTPGSRRAVGGAEEKFGGKEPKPAAPDPLPCSADLHQMFPTPPSLEQHIIMGYSPIN
MGNTESAAGLSLLDGTISGNFKMEVEEGFCSPKPSEIKDFSYVFKPESCQALIGCSLYAP
LKTLPSQCLLPIKLPEECVYRPSWTVGKLEMLQPMAAMTFLNKDSNIPSVGSAVEQDQSC
TPQTHNTFMSNSAPPSNSGAGILPSPATPRISAPTPRTPRTPRTPRGPASVQGSLKYENS
DLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCICVCN
MNITGADVGVYISDPNMDSQYSSMELCSCGFSAVMNRRYGNGSGLFLEDELDIMGRGSDA
GRETEKHFEAVRAASLQRGAALKEQVPDDLILLLQDLCTNPFSPIIRPEHPSTSLKLPMR
LEERDYYSDCYLALEHGRQFMDNMSGGKVDETLVKSSSLHHWAKRNAFDMSMLFSQDVLR
MLLSLQPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTLLVGY
EYDFVVLSPFALPYWEKLLLDPYSSQRDIGYMVVCPDNEALLNGAKTFFRDLTAVYESCR
LGQHRPISKSHADGIVMVNDTGSKPLTDQNLTDWLPKTINSSSEAFNKLKLYAQVCCHDL
ASILASQSLDSSLLSQRNPTSSTQTSNSGSPTTATQNTTPTTNSTSNTNTTTTAATPTST
TASSSSCSQGIGTMPSSKPNSLPPFGGLQSSQPSGGQSAGTLGDGTSATSQPQVQSEPAE
STMEREKVGVPTDGDSHAVTYPPSIVIYIVNPFSYEETGQGSDSCVWTMSLLRCYLEMLQ
TLPPHIRNAVYVQIIPSQYLLQPVWSEERHIYAQHLKSLAFSVYTQCRRRLPTSTNVKTL
TGFGPGLAIDTALQSKERPECLHLYAPPFVLAPVKDKQTELGETFGEAAQKYNVLFVAYC
LSHDQRWLLASCTDQYGELLETCVISIDVPNRARRKKGSARRQGIQKLWEWCLGLVQMTS
LPWRIVIGRLGRIGHGELRDWSILLSRRNLQSLSRRLKEMCRMCGISAADSPSILSTCLV
AMEPQASFVIMPDSVSTGSVFGRSTTLNMQSQLNTPQDTSCTHILVFPTSAGLQAFNPIN
DVNDGMGGMDGILDLLSENDLVDPDLINIIPNSPTTSPVQSPGSHYHHGGDGSKGQSTDR
MESHDESPNILQQPMALGYFVSTAKAGPLPDWFWSSCPQAKNQCPLFLKASLHLNVSSVQ
SDELLHSKHSHPLDSSHTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLNQMYN
FIMNML
NT seq
6321 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcttgttttgtacccaacggggcgagcctggaggactgccactccaatcta
ttctgtctggctgacctcacagggatcaaatggaagtgttttgtatggcagggccccacc
tcgtcccccatcctcttcccggtgacggaggaggaccccatcctgtgcagcttcagtcgc
tgcctgaaggcagacgtgctgagcgtgtggcgaaggcaccagaccccgggccggcgggag
ctctggatcttttggtggggagacgaccccaacttcgccgagctcgtccaccatgaccta
tcatgtaatgaggacggttcgtgggatagcggcctgagctacgagtgccgaacgctgctc
ttcaaagccatccataacctgctggagcgctgcctcatgaaccgatccttcgttcgcatc
ggcaagtggttcgtcaaaccctacgagaaggatgagaagcccatcaacaagagtgagcac
ctgtcctgctccttcacgttctttgtacatggagacagcaacgtgtgcaccagcgtggat
attaaccaacaccagcctgtctatctgttgagtgaggagcacctgactttggcccagcag
agcagcagctcggttcaagtgatcctctctccgtacggtttgagcgggactctgacgggc
cagtccttcaagctgtcagatccaccgacccaaaagctgattgaagaatggaagcagttc
tatcccataggcccaaacaccaaggaggtcgcagacgacaagatggatgacctcgactgg
gaggatgattccttggctgctgttgaggttgttgttgctggagtgaggatggtgtaccca
gccaacctggtgctggtggcccagtcagacatcccggtcatggccacagtgagctcttcc
acctcctccggctcttactcaggaggtcagcacagtcacatgatccatggagatactggc
atctcttcagtcactctgactcctcccacttcacctgaggaggctcaagcagtctctcag
cctgcccagaagtgggtgaaactctcagctatgtcaggcgcctttaatgtggacagcagc
agtcatcacggaggcaagatcccccgccggctagccaggcaaatgggggagcgagtctgg
caagagtgcaatattaaccgagcccagaacaagagaaagttttcaaccatgtctaatgga
gtttgcgaggaagaaacggacaaagcttctgtttgggactttgtagagtcgtctcagagg
tcacagtgcagttgctcaaggcttaagaaccagaaacagcgggcatgtagcaccccaggg
catcctccatctgctggccaacctcctcagccctctaccaaacacaagatggcggagaag
ctggagaaaggagacaagcagcagaaaaggccccagacgcccttccaccaccgcagctcc
ctatgtgaagaacagcctaacttggaacagggtgatgctgttcacaggctttgtctgcag
agccacgaggacagccgctaccccagccttcaccatgctgacgtcacctccaacaagacg
ccaatgatgcacagctcaactgacgagatggccggctcccctcagcccccaccgcttagc
ccgcacccttgcgagcgtggagaagagacggcagacggcctaaagacttcctcctcgccc
ttgcaccaacacttctaccctccttcctctgagccctgtctggtgccccaaaaaccccca
gatgattctctgctagacccattgcccttaccctgcccacctccatacccagagtcccta
gaagccaccgtatacgtgggctctgccattaaccccaacgaggatacgacgcataacccc
tggaagtactttagggtgcctggtgggaggaatacggatttccacacgcctcagcttcct
gtggtcacactattcgaagatggtaacagggccggaggccaggatggtgttgtgtcagtc
acagagtttatgtcctcctccaagaggcctctgaaagtgtcggaagagctggtaaagatg
tacgagcaaaagaaaaaccagcatctctctgcggctgtgtgtgatggagaccaggagcgt
gagtctgacccttacgcatttgtggaaggagacgaggagtttactttctctgataaagac
aaaaaacctggaaccgagagagaggccggaaagaaaaataagagggatgatggcagttcg
gcatcttctgatgatgcccaggggtcaggtggtagcaaaccacttcctacaaccagcttg
tttcatgagacggatctggttgtgtccattaacgacctggacaacctctttaactctgac
gaggatgacctgacgcctggatccaggagagctgttggtggagcagaggaaaaatttggt
gggaaagaaccgaaacctgcagcgccagaccccctgccttgctctgcagacctgcaccag
atgttcccaacccctccatcactggagcagcacatcatcatgggctactctcctataaac
atgggcaacacggagtcagcggctggcctctctcttctggacgggaccatcagcgggaac
ttcaagatggaggtggaggagggtttctgcagccccaaaccctcagagattaaggacttc
tcctacgtgttcaagccagagtcctgccaagcgctcatcggctgctccctttacgcccct
ctgaagacgctgcccagccagtgtctgcttcccatcaagcttccagaagagtgtgtgtac
cggcccagctggacagtcggcaaactggaaatgctgcagccaatggcagccatgaccttc
ctcaacaaggacagtaacatccctagtgtaggaagtgcagttgagcaggaccagagctgc
acccctcagacacacaacaccttcatgtctaacagcgccccacccagcaacagtggcgct
ggcatcctgccatcccccgccacccctcgaatctccgccccaacaccacggacaccccga
accccacgcacccccagaggccctgccagtgtccagggctcactgaaatacgaaaactcc
gacctctattcacccgcctctacgccctccacctgtcgacctttaaattcagtggagccg
gccaccgtgccctccatcccggaagctcacagcctatacgtcaccctcatcctctccgag
tcggtcatgaatctcttcaaggactgcaacttcgacagctgttgcatctgcgtctgcaac
atgaacattacaggggcggatgtgggcgtctatatcagcgatcccaacatggattcgcag
tactcaagcatggaactctgctcctgtggttttagcgctgtcatgaaccggcgctatggt
aatgggtccggcctctttctggaggacgaactggacatcatgggacggggttcggatgcc
ggacgggagactgagaagcactttgaggctgttcgtgcagcctcccttcagagaggggcg
gcccttaaagagcaggtcccggatgatctaatcctcctgttgcaggacctgtgcactaac
cccttctcccccatcatcaggccagaacatcccagcaccagtctcaagctccccatgcgt
ctggaggagagggactattatagtgactgctacttggctctggagcatggcagacagttc
atggacaacatgtctggtggaaaagtcgatgagacactggtcaagagctcctctttacac
cactgggccaaacgcaatgctttcgacatgagcatgctgttctcccaggacgtgctgaga
atgctgctgtcgctgcagcctgtcttgcaggacaccatccagaagaagaggtctgtgcgc
tcttggggagtccagggcccccttacctggcagcagttccacaagatggctggcagggga
tcgtatggcacagatgaatctccagagcctctccccatccccaccttactggtgggttac
gagtatgactttgtggtgctgtctccttttgctctgccatactgggagaagcttctgctt
gacccatacagctctcagcgggatatcggatacatggtggtgtgtcccgacaacgaagcc
ctacttaatggagccaagactttctttagagacttgacagctgtatatgagtcctgtcgg
ctcggtcagcacaggcccatctccaagtctcacgctgatggcattgtgatggtgaacgat
actggatccaaacctctcacggatcagaatctcactgactggcttccaaaaaccatcaac
agcagcagcgaggcatttaacaagctcaaactctacgctcaagtgtgctgtcacgacttg
gcatccattctggcatcccagtctttggacagctcactgctttcccaacgaaacccgact
agctctacacaaacttccaactctggcagccccacaacagccactcagaacaccacacca
accaccaacagcacctccaacactaacaccactaccaccgccgcaacccccacatccacc
actgcttcctcttcctcctgctctcagggcataggcaccatgccgtcttccaagcccaat
tcactgcctccttttgggggcttgcagtccagccagccgagtggtggtcagagtgcaggg
actctgggggatggcacgtcagccaccagtcaacctcaggtccagtctgagcccgcagag
agcacaatggagagagagaaagtgggagtgccgactgacggagactcccatgccgtcacc
tatcctccttctatagtgatctacatcgtaaacccgttcagctatgaggagactggacaa
ggcagcgattcttgcgtgtggacgatgagtcttcttcgctgttacctagagatgcttcag
actcttcctcctcacatcaggaatgctgtatatgtccaaattatacccagtcagtactta
ctgcagccggtctggagtgaggagcgccatatatacgcacagcacctgaagtctctggct
ttctcagtttacactcagtgcagacggcgtctgccaacctccactaacgtcaaaacgcta
acaggcttcggccccggcctggccattgacactgcactacagagcaaagagagaccagag
tgtttacatctctacgcaccgccgttcgtcctggcaccagtgaaggacaagcaaacagag
ctgggtgagactttcggagaggctgcccaaaaatacaacgtgctgtttgtggcctactgc
ctttcacatgaccagaggtggctcctggcttcatgcacagaccagtacggagagctgctg
gaaacctgcgtcatcagcatcgacgtacccaaccgtgctcggaggaaaaagggctctgca
cgacgccagggcattcagaaactttgggaatggtgcctgggactcgtacagatgacctca
cttccttggcgcattgtgattggccggctcggaaggataggtcacggagagctacgtgat
tggagtattctgttgagtaggcgaaacttgcagtctctcagcagacgactgaaggaaatg
tgcaggatgtgcggcatctctgccgcggacagtcccagcatcctcagtacctgtctagtc
gccatggaaccacaggcttcctttgtcatcatgccagactccgtgtccacgggctcagtg
tttggccgcagcacaaccctaaacatgcagtcgcagttaaacactcctcaggatacctcc
tgcactcacatccttgtgttccccacctctgcaggcctccaggccttcaatcccatcaac
gatgtcaacgacggaatgggcggcatggatgggatcttggacctgctgtcagagaatgac
ctggttgatcctgatctcattaacatcatacccaactctcccaccacctccccagtacaa
tcgccaggatcacattaccaccacggaggagacggaagcaagggccagagcacggacagg
atggagtctcacgacgagtctcccaacatcctccagcagcccatggctctgggctacttt
gtttccacggctaaagccggcccactgcctgactggttctggtcctcgtgtccacaggca
aagaaccaatgtcctctcttcctgaaggcttctctgcaccttaatgtttcgtcagtgcag
tcagatgagttgctgcacagtaaacactctcaccctctggactccagccatacctcagat
gtgctcagatttgtgctggaacagtacaacgccctgtcgtggctgacctgtgacccagcg
actcaggaccggcgctcttgtctgcccgtgcactttgttgtgctcaaccaaatgtacaac
ttcatcatgaacatgctctaa
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integrated database retrieval system
