Garra rufa (doctor fish): 141284758
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Entry
141284758 CDS
T11039
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf03440
Homologous recombination
grf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141284758 (brca2)
03460 Fanconi anemia pathway
141284758 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141284758 (brca2)
03036 Chromosome and associated proteins [BR:
grf03036
]
141284758 (brca2)
03400 DNA repair and recombination proteins [BR:
grf03400
]
141284758 (brca2)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
141284758 (brca2)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
141284758 (brca2)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
141284758 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
141284758 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
141284758
NCBI-ProteinID:
XP_073673869
LinkDB
All DBs
Position
14:complement(13757583..13773382)
Genome browser
AA seq
2677 aa
AA seq
DB search
MFDSFFHQIDTELGPLNPDWFEELTAKASRDEGCPDILKAKEEKTAKVPETSALSSQLFS
TPKIFKQRLFQSPASIPNEESPCEVANGDSSAFPWTDSSPCLFDSAKDSQRFDRSTEKPG
DCFGLLDTPKRSLARSAKQISESLGAQINPIDLSWTSSFNTPSSLTPTVILPKTEDRASS
ESGLKYKEAIFVRKLFPSLSKGSASNATLSDMTLKENGIVKSESLQADDLGEKPVCSLNT
SLDTSGLWKQKVPSAIEDGDVRSTVQNVLDGAEDVLSIFFSNNTSTLRRIKTKERIRKRI
TDSPKDVKSVVQISEPEEILKDEVETESPSKNKDIIQWTPLSLPECLLNGDCSDTSLINN
HNTGASSETNVFNCVAESSQMFSQSDRLKSHPEGTQKTSLDILPAFMLTRKPRKFVYQVP
SSDLSKTAVGHKETQPVCLDQTFKEDPSVEEICSDLAGSRVASENAVSSHSQPQDVKQLS
TEPHDLDHGLDMTQLSKAFAEDFTQEIIPGELLDMPVQSDQNGQVQHKSELEEINEDAMK
THNDISNLADISVNSPNKSAVMLTTFEISHDSGCPTTFSDLDGTTASCADFKDFCLSFKT
ANNKSISISNEAIMKAKTSLDEAAGDVLINTFNGITPKHYQTIETCKSVSGSTNAMRPPT
EKSIFPNHASKVRFPKSDSPKSCEINISSCSSPQSNESDYKTGSKRNITVSDVGFQTETL
LKEKSGRGSDSSKCIHQKLDFKSSAERQTVFEINSTHKSTTVDSSCDDDEKNGTLTASQK
ADVTELCNLLEEANSQHEFTQFKPTNPGSDNHTTEKEWDADILNGIDFDDSFNCDVVKGK
HPVKMDASSINSSDHIQIVDAAKLASTMSKETLNGIVSLAEDKQKSVKSHISDNTPIHCF
GFKTAKGKAISISEKSLNDARHFFEEDDQKAMYNEEVKMEIGLIKSEQAETVPSVKTSDS
MNTENKNYIQTKQDGNFSCGDVNASCKEINKHLAGNEGMEQSCLGEKTDVVCVDSNSHFG
FSTAKGAKLKVSEKALLQARRLLNDVDSLEESQTHKPTLPASGEQAVSRSKTSMKISQPH
LVTEISDNPSFKSEKVFQERKSSNVPKEVFAKICPTETFLPQAMEGYGFQTASGKGVSIS
ACALKKAKAIFNDCEENITLESVSMEEPNDKLNVEIKQEKACTTKCKSVTFSNVSLIESN
AVLGDTDLTNDISLKPFSVQEPPQEVVGSEGKGLQSEFSSELLPPNTNCGFSTASGKNLL
SESVDGFSCADGSPKMQQVVDIQADTSSIGIHGGFSKAGGKKVAVSASGLQKANNLLSDC
EEESLSSEDPQHQNLKGCSDVSFSHEHETRGSSEKNIGFSTAGGKKVAFSAAALQRAKSL
FKDCEEESLASGSLQHQGFHGFSTASGKDVSVSEKALSEVRVAFAGCDDNSFHHRPENSS
GNNMGFSTAGGKNVTISATALQRAKGLLKDCEEENVPSEKITPQTKSSEDIVDGNQRFEQ
LNQRNYGFSTASGKGVSVSKVALEESSKLFRDCDAQITDSQLLQSDSSKCHPQHKDKQTE
TALHPLPSKTTQKEPTQLDLHSLDFNSCTDTQQKYFEQEAMACTKALLADDDLNESPSLA
KTQDKKSPSVHDLQTQGSFDQNRRKRPFDARNAADSGQPPLKRQLLSEFDQTLDGKTKGL
IPLKSCPNGTLRDRRVFSYNVHLKPNITGPNWYPMDLKQQCSTVSVQDRRNSDPKGGVFV
PPFPKGVKTRTSNCQDISKVSTGFIPPFKKDNKETTEHSNQIDQNMTTSTSHSDSVAQHC
DEKNLHEGSNPKLTTSVESVPLKITDSEEKDTEAWQETLNLARNMQDMRLRKKKRQTIRP
LPGRLYLAKTSGNARIRLRDAVGCKCPAQYSQEEHGVHQKVSQITSENAESFRFDYNDFF
KCELLDESGAVQLADGGWLVPDKKGTVGKEEFYRALCDTPGVDPKLISDVWVFNHYRWIV
WKRASMERTFPDLMGSLCLTPEQVLLQLKLRYDVEVDHSQRSALRRIMERDDTPAKTLVL
CVCGVAQTSENPEKPIKDDKTPNAKMESCVVWLTDGWYSIKGLLDPPLSAMLNKGRLRIG
DKIVTSGAELVGSQEACPPLEAPESLMLKISANSTRRARWDTKLGYYRDPRPISLSLSSL
FTTGGVVSCVNIVVLRSYPTQWMEKKPNGVFIFRNDRAEDREARKHNNSKHKSMDLLISK
IQTQFEKEMEGKKKSRGQRRTFSRHDMEALQDGEELYEAMECDPAVETHLSERQMDAVSK
YRCCLEERRQTELQERVQKAVMEAQEAEGGCPNRDVTSVWKLSITDANDLQSNCVYTLNI
WRPSQDLYGLLREGHRYRAYHLSTSEGKKRSGIAHIQLTATKKTLFQDIEVSPEWLHQHF
HARECVRFRELQNTQFSSPCGEVDIVGCIVSIEGKQGHCPLLHLVDENFDLISVRTYSSL
EQLAVEELVKQRALVALSNLQVKPLSGPVPSLYAGEQAVFSVNPKESHLQEAMTRLKTFV
QTCERFFSIAEEKLSDVVPSGVLGSFQSPRTPGVQSNPKINGRVTPQQKTSVFSPFTPLN
KRTPAPACNSEGKDPKSFKRRRGLDYLSRIPSPPPLTPLKTSASPCVNRTFNPPRRSVTP
KPPQNASPRASRPPPGEEKWVHDEELAMIDTQALLEG
NT seq
8034 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagtttctttcatcaaattgacacagagcttggacctcttaatcctgactgg
tttgaggaattgactgcaaaagcttccagagatgaaggatgtcctgatattttaaaagct
aaggaggagaagactgccaaagtaccagagacatcagccttgtccagtcagctgttttct
acccctaaaatattcaagcaacgactctttcaatcccctgcttccattcctaatgaagag
tccccttgtgaagtggctaatggagactcatcagcttttccctggacagactcaagccct
tgtttgtttgattcagccaaagacagtcaaaggtttgatagatccactgaaaaacctgga
gattgctttggccttctggacacaccaaaaaggtctttggcacgttcagcaaaacagata
tctgagagtcttggggcacaaatcaaccctatcgacctatcctggaccagctcctttaac
acaccatcatctttgactcctactgtgatattacccaaaacagaggaccgtgcttcatca
gaaagtggcctcaaatacaaggaagcaatatttgtgcggaaactcttcccatctctctcg
aagggctctgcaagcaatgcaacattgagtgatatgacactaaaagaaaatgggatagtc
aaaagtgagtcccttcaggctgatgacttgggagaaaagcctgtttgctctctaaacaca
tctcttgatacaagtggactgtggaagcagaaggttcccagtgctatagaggatggggat
gtccgcagcacagtgcagaatgtacttgatggtgctgaggatgtgttgtcaatattcttc
agcaacaacacttcaactctgcgaagaatcaaaaccaaagagaggatcagaaagagaata
acagattcaccaaaggatgtcaaatcagttgttcaaatttcagagccagaagagatatta
aaggatgaggtagaaacagaaagcccaagcaaaaataaagacatcattcagtggactcca
ctaagtttgccagaatgccttcttaacggagattgttcagacacatctttgataaacaat
cacaacactggagcatccagtgaaactaatgttttcaactgcgttgcagaaagtagccag
atgttttcacagagtgacagactgaagtctcatccagaaggaactcagaagacttcgtta
gacatattgcctgctttcatgcttactagaaagcctagaaagtttgtgtatcaagtacca
agttcagacctgtcgaagacagcagttggacacaaagaaactcaaccagtatgtttggac
caaacgttcaaagaagatccctcagtagaagagatttgtagtgaccttgctggatccaga
gtcgccagtgaaaatgcagtcagtagtcattcacagccacaagatgtcaaacagttatct
acagaaccacatgatcttgaccatggactagatatgacacagctttccaaagcatttgct
gaggatttcacacaggaaataataccaggagagctgcttgacatgcctgtacaaagtgat
caaaatggccaagtacaacataaatcagaacttgaggagataaatgaagatgccatgaag
actcacaatgacatctctaatttagcagacatatctgtgaactccccaaacaagtcagca
gtcatgcttacaacttttgaaatcagtcatgacagcggttgcccgaccaccttttcagat
ttggatggtacgactgcctcatgcgcagatttcaaagacttttgtctttcttttaaaact
gcaaacaacaagtccatttctatatcaaatgaggctataatgaaggccaaaacatcattg
gatgaagctgcaggggatgttttgattaacacctttaatggaattactccaaaacattat
caaacaatagaaacgtgcaaatcagtttcaggaagcactaatgcaatgagaccgcccaca
gaaaagtccatctttcctaaccatgcatcaaaagtgcgttttccaaaaagtgacagtcca
aagagctgtgaaattaatatttcaagttgctcttcaccacagtcaaatgaatctgattat
aaaactggttcaaagaggaatattacagtttcagatgttggctttcaaacagagactctt
ttgaaagagaaatcggggagaggttcagattcatcaaagtgcattcatcaaaaactggat
ttcaaaagtagtgctgaaagacagactgtttttgaaattaacagcacacacaaatccacc
acagtggactctagctgtgatgacgatgagaagaatggcactttgacagcatctcaaaag
gctgatgttacagaattgtgcaatcttttggaggaagcaaatagtcaacatgaatttacc
cagttcaaacctacaaatcctggctcagacaaccacactacagagaaagagtgggatgca
gatatactcaacggcatcgactttgatgatagttttaactgtgatgttgtaaaaggaaag
catcccgtcaagatggatgcttcttcaataaacagttctgatcatattcaaattgtagat
gcagccaaattagcaagcaccatgtcaaaggaaacactaaatggtattgtgtctttggct
gaagataagcagaagagtgtaaagtctcatattagtgataatactccaatccattgtttt
ggttttaaaactgctaaagggaaggctataagcatctcagaaaagagtttaaatgatgca
aggcactttttcgaagaggatgatcaaaaggcaatgtataatgaagaagtcaagatggaa
attggattaataaagtcagagcaagctgaaacggtgccttcggtcaaaacttctgacagt
atgaacacagaaaataaaaactacattcagactaaacaagatggcaatttcagctgtggc
gatgtaaatgcatcttgtaaagagataaataagcatttggcaggaaatgaaggaatggag
cagagttgtttaggtgaaaaaacagatgttgtttgtgttgactccaatagtcattttgga
tttagtacagctaagggagcaaagctgaaagtgtctgaaaaggctcttttgcaagcaaga
agacttcttaatgatgttgacagcttagaggagtcgcaaactcacaaacccactctccct
gcttctggagaacaagcagtttcaaggagtaaaacctctatgaaaataagtcaaccacac
ttagtaactgaaatatctgataatccgtcctttaaaagtgagaaggtctttcaagaacgg
aagtctagcaatgttcccaaagaagtttttgcaaagatttgtcccacagaaacttttttg
cctcaagctatggaaggctatggctttcagactgccagtggaaaaggagtttccatttca
gcctgtgcgcttaagaaggcaaaggccatatttaatgattgtgaagaaaatattaccttg
gaatctgtgagcatggaggaaccgaatgacaaactgaatgttgaaatcaaacaagaaaaa
gcatgtactacaaaatgcaaaagcgtgacattttcaaatgtgtctcttattgagagcaac
gctgttctcggagacactgacctgactaatgacatttcactgaagcccttttcagtccag
gaaccccctcaggaagtagtagggagtgaggggaaaggccttcaaagtgaattttcttct
gagttgcttcctcctaacaccaactgtggtttcagtactgccagtggtaagaatctgctg
tctgagtctgttgatggtttctcatgtgctgatggttctccaaagatgcagcaggttgtt
gatatccaagcagacactagctctataggaatacatggaggattctctaaagcaggtggg
aagaaggtggctgtctctgcttctgggctgcaaaaggcaaataatctcctcagcgattgt
gaagaggagagtttgtcatctgaagatcctcagcaccaaaatttaaaaggttgcagtgat
gtctccttcagccatgagcatgagactaggggttcttcagaaaaaaatattggatttagt
acagccggtgggaagaaggtggccttttctgctgcagccctgcaaagggcaaagagtctt
tttaaagattgtgaagaagagagtttagcttctgggagtcttcaacaccaaggctttcat
ggtttcagcactgccagtggcaaagatgtttctgtctctgaaaaggcactgagtgaggtt
agagtggcatttgcaggttgtgatgacaattccttccatcatagacctgaaaattcttca
ggaaacaacatggggttctctacagcaggtgggaagaatgtgaccatctctgctactgca
cttcagagggccaagggtcttcttaaagactgtgaagaggaaaatgtaccatctgagaaa
atcacacctcaaactaagagcagcgaggacatagtggatggaaaccaaaggtttgaacag
ctaaaccagagaaattatggtttcagcaccgcaagtgggaaaggtgtgtctgtatcaaaa
gttgcccttgaggaatcttctaaattattcagagattgtgacgcccaaattactgatagc
cagctgctacaaagtgattcttcaaaatgccatcctcaacataaagacaaacaaaccgaa
accgctctacatcctttgccatctaaaacaactcagaaggaacctacacaactagacctg
cactctttagattttaacagttgtacagacactcagcagaagtactttgagcaggaagca
atggcttgcactaaagctttactggcagatgatgacctgaatgaatcacccagtttggca
aagacacaagacaaaaaaagtccatctgttcatgatctacagacacagggatcttttgac
cagaacagaaggaagcgtccgtttgatgccagaaatgcagcagattcaggtcagcctcct
ttgaaaagacaacttctctcagagtttgaccaaacattagatggaaagaccaaaggcctc
ataccactgaaaagctgtccaaatggaactttaagagacaggcgtgtcttcagttataat
gtccatctcaagccgaatatcactggtccaaattggtatcctatggaccttaagcaacag
tgttcaactgtgtctgtccaagacagacgcaactcagaccctaagggaggggtgtttgta
cccccttttccaaagggtgtgaagactaggacatcaaactgtcaagatatctctaaagtg
tccactggttttatcccacctttcaagaaggacaacaaagaaacaacagaacatagcaat
caaatagatcaaaatatgacaacttctacatcacatagtgatagtgttgcacaacattgt
gatgagaagaacttacatgagggttctaaccctaaactaaccacttcagtggaaagcgtg
cctttgaaaatcacggactctgaagagaaagatacggaggcttggcaggagaccttgaac
ctggccaggaatatgcaagacatgagacttcgaaagaagaaaaggcagactattcgtcct
ctccctggcaggctctaccttgccaagacatctggtaatgccagaatacgtctgagagat
gctgtgggatgcaaatgtcctgctcaatactcacaggaggagcatggtgtacatcaaaag
gtctcccaaataacaagtgaaaatgctgaatcattcagatttgactataatgacttcttc
aaatgtgagctccttgatgagtctggtgctgtccagctggcggatggaggctggttggtt
ccagataaaaagggtactgtgggcaaagaagaattttatagagcattgtgtgacacccct
ggtgttgaccccaaactgatcagtgatgtctgggtattcaaccattaccgatggattgta
tggaaacgggcctccatggaaagaacatttccagatttgatgggtagcctgtgtttgact
ccagagcaagtacttctacagctaaaattgagatatgatgtggaggtggaccacagtcag
agatccgctctcaggaggatcatggagagggatgacactccagctaagacattagtgctc
tgtgtatgtggtgttgctcaaacttctgaaaatccagaaaagccaatcaaagatgacaaa
actcctaatgcaaagatggagtcctgtgtggtctggctcactgatggctggtactccatt
aaaggcttgttagatcctccgctctctgccatgctgaataagggccgtctccgaatcggt
gataagattgtgaccagtggagcggaattggttggttcccaagaagcctgccctccactg
gaagctcctgaatctctgatgctaaagatttcagccaacagcacaagacgtgctcggtgg
gacacgaaattggggtactaccgtgaccctcggcctatcagtctttcactgtcatcactg
ttcactactggaggtgttgtgagctgtgtcaacattgtggtgttgagaagttaccccact
cagtggatggagaagaagcccaacggtgtctttatatttcgcaatgatcgtgcagaagat
cgagaggccagaaaacacaacaactccaagcacaaatccatggatcttctcatttccaaa
atacaaacccagtttgaaaaagaaatggaaggtaaaaagaaaagtcgaggccaaaggagg
acatttagtcgacatgacatggaagctttgcaggacggggaagagttgtatgaggccatg
gagtgtgatcctgctgttgagacccatctaagtgagcggcagatggatgcagtgagtaag
tacaggtgctgtttagaggaaaggaggcagacagagcttcaggagcgtgtgcagaaggct
gtaatggaagcccaggaggccgagggtgggtgtcccaatcgagatgtcacttctgtttgg
aagctcagcattactgatgccaatgacttgcagagcaactgtgtttacaccctgaatatc
tggcgcccatcacaggacttgtatggcttgctaagagagggccacagatacagggcatat
catctcagcacatcagaggggaagaaacgctcaggcattgctcacattcagctcactgcc
accaagaaaacactcttccaggatattgaggtgtctccagaatggttgcatcagcatttc
catgctcgagaatgcgtacgtttcagagaacttcagaacactcaattcagctcaccttgt
ggggaggtggacattgtgggatgtattgtctccatagagggcaaacaaggccattgcccc
ctactgcatcttgtggatgagaactttgacctgatctctgtgagaacctacagtagtcta
gagcagttagcagtagaagagctggtaaaacagcgagccctggtcgcacttagtaatctt
caggtgaaaccactctctggacctgtgccgagtctttatgcaggagagcaagcagtattc
tctgtaaaccccaaagaatcccatctgcaagaagctatgacccgtctgaagacttttgtc
cagacgtgtgagcggtttttcagcattgcggaggagaagctctcagatgtggttccttca
ggtgtcttgggttcttttcagtctccaagaactcctggtgtgcaatctaatccaaaaatt
aacggcagggtaaccccacagcagaaaaccagcgtgttctcgcctttcactcccttgaat
aagagaactcctgcacctgcatgtaacagcgaaggaaaagaccccaaaagttttaaaaga
agacgcggtttggactacctgtcacgtatcccgtcccctccacccctcactcctctcaaa
acttcagcttctccctgcgttaacaggaccttcaatcctccacgtaggtctgtgacaccc
aaacctccgcagaatgcatcacctcgagcctcacgtcccccaccgggagaggagaagtgg
gtgcacgatgaagagctggcgatgatagacacccaggcgttactggaaggctga
DBGET
integrated database retrieval system
