Garra rufa (doctor fish): 141284773
Help
Entry
141284773 CDS
T11039
Symbol
synrg
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141284773 (synrg)
Membrane trafficking [BR:
grf04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
141284773 (synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
141284773
NCBI-ProteinID:
XP_073673888
LinkDB
All DBs
Position
14:27808162..27884125
Genome browser
AA seq
1410 aa
AA seq
DB search
MALRPGSGGGGSFMYPVGGGIGPPQGMMPMQQQQQQGFPMVQVMQPNMQGMMGMNFGAQM
PGAMPIQGGMAMGMQTPGMQFMGQPQFMGMRGPGPQFPADLQKQMAEEHQKRLEQQQRML
EEDRKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTPSSQSK
KPDSSPSHSSVTSQSLPPAFPDDDDEFSDFVQGPVDASSSFPSSSLPPSSPSMRAAHISQ
PLETGPGQHPPSSPVPHSVPSSLPVSPAIQHSSVISSSQSAFQGPSLEEKMFSSCDLTTD
KKAQVRFKPRQALSDLSPRAQVTAQFHSSTKARNWAHTQDDFNSAFIVEKPSEPLPATQA
PPAADNPPVQPTSTSGVGVYPQQDMQPMVPAWLYNDSLIPELFKKVLEFTMTPTGIDTAK
LYPILISSGLPREALGQIWALANRTTPGKLTKEELYTVLALIGVAQSGLTVMSLDILSQF
PSPPVPNLPAMAMTIPAVLPQHQQQIMTQPPVSMAMPTAAPPVMGITPNPPAQPPASFIT
NFPPVQATKADDDDFQDFQEAPKAGTGDDSFTDFQGETGGAFPSMTTSSQSGVPAMLTPV
SGSSSSSSSDKYAVFKQLSVEQPAEPTPPVSDSGDKYSVFRELEKPSDRKPVGEGFADFK
SVSADDGFTDFKTADTVSPLDPPDQAKFQPTFPPPFTSSQSLSHSQPTSLAQPRNPLNMA
DLDLFTTMAPPAPAATSTADSKLNLFPSAPPSLVLPSVAKPPSVGGDDFGDFALFGSSTS
SEVAPTTTTVGRATGTKVQDDFADFMAFGSSRDQRSETSSGDGGNEGQAETSKQRQQIST
DKYDVFKQLSLEGGLAYDDNKESGGGSFSSLKSDNDDFADFQSSKFCTALGASDKSLVDK
VAAFKQAKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQLDMKLSDMGGDLKHVMSDSSL
DLPGLSSHQPPAAESDDLKFDPFGTSTVSSLGSYDWSDKEDLSSGQGKKLQGGLPSSAVV
QRKETSFGSSENITHTTVAKVTTFPIEDGGPTTESRFEAFADFGSVEQAGQDNDDDFGDF
ASTVSEKSDSPLGTTEAEGSQGELTDEFGAFQGDKPKFGKSDFLKASTQAKVKSSEEMIK
NELATFDLSVQGSHKRSHSLGEKEIVRSIPSPAPEQPFRDRSNTLNEKPALPIIRDKYKD
LTGEVEESERYAYEWQRCLESALQVITTANNTLNGISSSTVCTEVIQSAQGMEYLLGVVE
VYRVTKRVELGIKATAVCSEKLQELLKDISRVWNNLMGFMSLANLSPDESSLDFSSCILR
HGIKNAKELACGVCLLNVDSRSKKKDENTFGRLFKRALTKDSRSKLRAFNSETDNFKLMY
GGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcggcccggatcagggggaggtggcagttttatgtaccctgtaggagggggc
attggaccaccgcaaggaatgatgcccatgcagcagcaacagcagcagggcttcccgatg
gtgcaggtcatgcagcccaacatgcaagggatgatgggaatgaattttggagcacagatg
cctggtgccatgccaatacagggagggatggcgatgggcatgcagactcctgggatgcag
ttcatgggtcagcctcagttcatgggcatgaggggcccggggccacaattccctgcagac
ctacagaaacagatggcggaggagcatcaaaaacgtttggagcagcagcagcggatgctg
gaggaggaccggaagagaagacagtttgaggagcagaaacagaaactacgcctactgagc
agcgtcaaacccaaaactggagagaagagtcgtgacgacgccttagaggccatcaaagga
aatctggatgggttcagcagagatgccaagatgcatccaacaccatcttcacagtctaag
aaaccagactcatcgccatctcattcctctgtcacctctcaatcccttcctcctgctttc
cccgatgacgacgatgagtttagtgactttgtgcagggccccgtcgatgcctcctcctca
ttcccctcttcatccctccctccatcctccccttcaatgagagctgctcacattagccag
ccattagagacggggcctggccagcatcccccttcctcccctgtccctcactctgtccct
tcatctctccctgtctcacctgccatccaacactcttctgtcatctccagctcccaatct
gcattccaaggcccatctttggaggagaagatgttttcgtcttgcgatctgaccactgat
aagaaggcccaggttagatttaaaccacggcaggctttgtctgatctgagtcccagagct
caggttacagcccagtttcacagcagcaccaaagctcgaaactgggcccatactcaagat
gacttcaattcagccttcatcgtagagaagccatctgagcctctacccgcaactcaggcg
ccccctgcggcagacaacccgcccgtccagcccactagcaccagcggtgtgggcgtctac
ccccagcaagacatgcaacccatggtgccagcctggttgtacaatgactcgctcatccca
gagttgttcaagaaggtccttgagttcaccatgacaccaacaggtattgacacagccaaa
ctctacccaattctgatatcatcgggtctgccacgggaagctctcggacaaatctgggcc
ttggctaaccgcaccacacctggcaagctgactaaggaagagctgtacaccgtactggct
ttgattggagtcgcccagagcggtcttacagtcatgagtctggacatcctgagtcagttc
ccctccccacctgtgcccaacctacccgcaatggctatgaccattcctgctgtcctgcct
cagcaccagcagcaaatcatgacccagccacctgtgtccatggccatgccgactgccgcg
ccgcctgtcatgggaattaccccgaatccacccgcacaaccaccggccagcttcatcacc
aacttccctcctgttcaggctaccaaggccgatgacgatgatttccaggacttccaggaa
gctcccaaagctggcactggagatgactcattcacagatttccaaggagagacaggagga
gcgttccccagcatgacgacatcgtcccaaagcggtgttcctgccatgctgactccagtg
tcagggtcttcatcctcctcctcctctgataaatacgcagtgtttaaacagttgtcagta
gagcagcctgcagaacccacaccccctgtctcagattcaggggacaaatacagtgttttc
cgagagcttgagaagccttcggacagaaaaccagttggggagggatttgctgatttcaag
tctgtcagtgccgacgacggcttcacagactttaaaacagccgacaccgtctctccacta
gacccaccagaccaggccaagttccagccaacttttcctcctcctttcacttcttctcaa
tctctgtcccattctcagccaacctccctggctcaacctagaaatcctctcaatatggca
gacctggacctcttcacaacaatggctcctcccgctcccgctgccacttccactgctgac
tccaaactcaatctgttcccttcagcgcctccatccctggtattgccctcagtcgcgaaa
cctcccagcgtggggggtgatgactttggagactttgctctttttggctcctcaacgtcc
tccgaagtagctcccaccaccactacggttggaagagcaactgggacaaaggttcaggac
gactttgctgacttcatggcgtttgggagctcgagagatcagagaagcgagaccagctct
ggagacggtggaaatgaaggccaggcggagacgtccaagcagaggcagcaaatcagcact
gataagtacgacgtcttcaagcagctttctctagaaggtggcctggcctacgacgataac
aaagaaagcggtggaggctccttctcgtcgctcaagagcgacaatgacgactttgcagat
ttccagtcctccaaattctgtacggcgctgggcgcgtccgacaagagcctggtggacaaa
gtggccgccttcaagcaggccaaagaggactctgcctctgtgaagtccctggacctcccg
tccattgggggcagcagcgtgggtaaggaggactcggaggatgcactctcagtacagcta
gacatgaagttgtcagacatgggaggagacctgaagcatgtgatgtctgatagctcccta
gatctccctggtttgtcatcccatcaacccccagctgcagagtctgatgatttgaaattt
gaccccttcggcacatccaccgtcagcagtcttggcagctacgactggtccgacaaggaa
gatctctcgtctggtcaaggtaagaaactccagggaggactgccatcttcagctgtcgtc
cagaggaaagagacgtctttcgggagctcggagaacatcacccataccacggttgcgaag
gtgaccacctttccaatcgaagatggtggccccaccaccgaaagccggttcgaagccttt
gctgactttggctccgttgagcaggccggtcaagacaacgacgacgactttggcgacttt
gccagcacggtttcggagaaatcggactcccctcttggaaccacagaagcagagggcagc
cagggtgaactgacggatgagtttggagccttccaaggtgacaagcctaaatttggcaag
tcagacttcttgaaagccagcactcaggccaaagtgaaatccagtgaagagatgatcaag
aacgaactcgctacctttgacttgtctgtgcagggttcccataagcgtagccacagtctg
ggagagaaagaaattgtacggtccatcccctctcctgcccctgagcagcccttcagagac
cgatccaacaccctaaatgaaaaacccgcgctgccgatcatccgcgacaagtacaaggac
ctcacaggagaggtggaggagagtgagcgatacgcgtacgaatggcagaggtgtttggag
agcgctctgcaggtcatcaccactgccaataacacccttaatggcatcagcagctccacg
gtgtgcacggaggtcatccaatcagcacaagggatggagtacctgctaggtgtggtggag
gtgtatcgtgtgaccaagcgtgtagagctgggtatcaaagccacggccgtttgttcagag
aaactacaggagctgcttaaagacatcagccgcgtgtggaacaacctgatgggcttcatg
tcgctggcaaacctctctcctgatgagagctcactggacttctcctcctgtatattgagg
cacggcattaagaatgccaaagagctggcctgtggagtgtgtctgctcaacgttgactcg
cgcagcaagaagaaagacgagaacactttcggacggctgtttaaaagagcactgacaaaa
gacagtcgctccaaattaagggcctttaattcggagacagacaacttcaagctgatgtac
ggaggtcaccagtaccacgccagctgcgcgaacttctggattaactgcgtggaacccaaa
ccaccgggtctcatcctgcctgacctgctctag
DBGET
integrated database retrieval system
