Garra rufa (doctor fish): 141284816
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Entry
141284816 CDS
T11039
Symbol
samd4b
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141284816 (samd4b)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
141284816 (samd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
141284816
NCBI-ProteinID:
XP_073673933
LinkDB
All DBs
Position
14:complement(3036390..3055318)
Genome browser
AA seq
671 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLDHWLADCTEIHILEA
EANNAAIVSQWQQEPKEKAVSLLLSHLPLLQPRNSEAKCEYMNLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRNSLAMWLNHLEEHLSSRPPPPGPYHHARQGSDEWPCSAES
LEPSYGWQEKLPSTCSSPAGQNGHMAFPGVTSPVNSSTAGLAGQVQPSPLKPSMSLTPAN
QSACSSDWLSQEEGGGCQGVSGAEHAPLSPQSSVASSGSEQTEDQSNMRNTFQEDGSGMK
DVPAWLKSLRLHKYASLFSQMTYEEMMILTEQHLESQNVTKGARHKIALSIQKLRERQSV
LKSLEKDILEGGNVRNALQELQQIIITPIKVYATPTAAQKEVEPGVTPTDKAANPGEEKE
SEGFQTHNPPACDGESPSAPIGDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQLIEK
CLTHEAFTETQKKRLLSWKQQVLKLLRLFPRKTMMDSSVYRRGWQQYGSNSLPTAGSVSA
GLGRRGQRPFQMPPRGAPPPGRIGLMSAGGLTGASPRHTLANPAAVSAQGRQNLWFGNPG
GSNSMPSQSRSSVQRTHSLPVHTSPQTMLLFQQQECQVPGTDLEINPTLESLCLSMTEHA
LGDGMDRTSTI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaagtggggattttgacggactggtttaagggctggaacgagtgc
gagcagacggtggcgctgttgtcgctgctgaagcgcgtctctcggactcaggcccgcttc
ctgcacatctgtctggaccactggctggccgactgcaccgagatacacatactggaggcg
gaagccaacaatgcagcgatcgtcagtcagtggcagcaggagccgaaggagaaagcggtg
tcgctgctgctgtctcatctccccctgctgcagccgcgcaacagcgaagccaagtgtgaa
tacatgaacctgctgcagaaggtcttgagccacaccatcgagagcagcctgttcgtggag
gagagtcggcagctgctgtcctacgccctcatccatcccgccaccaccctcgacgaccgc
aactctctggccatgtggctcaatcacctggaggagcacctgtcctcgcggccgcctccg
cccggcccgtaccatcacgcccgccagggatccgacgagtggccgtgttcggccgagtct
ctggagccgtcgtacggctggcaggagaagctgccgtccacctgcagttcgccggccgga
cagaacggacacatggctttccctggagtcacctcacctgtcaacagcagcacagcaggt
ctggctggtcaggtgcagccgagcccactaaagccctccatgtccctcacccccgccaat
caatcggcctgcagctctgattggctgagccaggaggagggaggcgggtgtcagggtgtg
tccggagcagaacacgcccctctgtcgccgcagagcagcgtcgcatcgtccggcagcgaa
cagacggaggaccagagcaacatgcgcaacactttccaggaggacggcagcgggatgaaa
gatgtcccggcttggctcaaaagtctccgtctgcataaatatgcgtcgctcttttctcag
atgacgtatgaagaaatgatgattctcacagaacagcacctggagtcacagaacgtgacg
aaaggagctcgacacaaaatcgctctgagcatacagaaactcagagaacgacaaagcgtc
ctcaaatctcttgagaaggatattctggaaggcgggaacgttcggaatgctttacaagag
cttcagcagatcatcatcacgccaatcaaagtttatgccacgcccactgctgcacagaag
gaggtggagcctggagttacacctacagataaagcagccaatcccggagaagagaaggag
agcgagggcttccagacccacaatcctccagcgtgcgacggagaatcgccgtctgcaccc
atcggagacggagacatcgcgggacagttcacgcgtgtgatggggaaagtctgtacgcag
cttctggtgtccagaccggatgaggagaacatcagctgttacctgcagctcattgagaag
tgtctgacacacgaggcgtttacagagacgcagaagaagcggctgttgtcatggaaacag
caggtgctgaagttgctccgcctcttcccacggaagaccatgatggacagcagcgtttac
cggagagggtggcagcagtacggatccaactctctgcccacagctggatctgtgagcgca
ggtttgggcagacggggccagaggcccttccagatgcccccgcgaggagctcctccaccc
ggccgcatagggctgatgagtgctggcggtctgaccggagcatcaccgcgacacacgctc
gctaaccccgccgccgtcagcgcacagggacgacagaacctgtggtttgggaatcctgga
ggcagtaacagcatgcccagccagagcagaagttcggtgcagagaactcattcacttcct
gttcacacgtctcctcagaccatgctcctgttccagcaacaagaatgccaagtcccgggg
acagatctggagatcaaccccacgctggagtctctgtgcctcagcatgacagagcacgcc
ttaggagacggaatggacagaacgtcgacgatatga
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