Garra rufa (doctor fish): 141284859
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Entry
141284859 CDS
T11039
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141284859 (smc4)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
141284859 (smc4)
Condensin II
141284859 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
TPR_MLP1_2
AAA_29
Crescentin
Motif
Other DBs
NCBI-GeneID:
141284859
NCBI-ProteinID:
XP_073673982
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All DBs
Position
14:complement(37768622..37804833)
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AA seq
1296 aa
AA seq
DB search
MPTKTTKSSTAAKRAAEARDDSDDEQPAARKPTSSAASAESSTPPRLDDAAPGESAEELD
NRSLEEILASIPPPPPPAMSSEPGAPRLMITHILNRNFKSYAGEQILGPFHKRFSCIIGP
NGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDSHPDIQSCTVEVHFQKIIDKEGDD
YEVIPNSSFFVSRTAAKDNSSSYHVNGKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQ
IAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPINTLCRRVELLNEQRGEKLNRVKLVEKE
KSALEGEKNKAVEFLTLENDIFKKRNLLCQFYVHDLQKRASAKEAEKQQIQEDTKELSDK
SSQLTEALKTKNEDLKGVEKKLTKLTKFIESQKEKFTQLDLQDVEVREKLKHTKSKTKKL
QKQLPKDKEKLEEVRSVPASSEKIITEASAQKEELEKKKLVEEQKLAQVMESLKEETSGL
QEDKEKKEQELLELSKAVNETRSRMDVAQSELDIYLSQHNTAVNQLNQAKNALQEAVDTL
RERKATIKDLNVKIPQCEEQLKKDEQELEQISEQDRQKRVQVGDMRQKVAEAKSSLSTNR
SRNKVLDALMQQKRSGKIPGIMGRLGDLGAIDEKYDIAISSSCGSLDNILVDTIDTAQKC
VTFLKTQNIGVATFIGLDKMKVWQQNMGSISTPENIPRLFDMVRVKDESVRPAFYFALRD
TLVAKDLEQATRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSVCADFTQE
QLDKMESDLNKEVTQLQDWQQRKQQLEEKVHKARRELRDMKNTLETYTATIQSLTEQELH
LKTQMKDLEANVISAAPDKAKQKQMEKSLEAYRKDFEAASTKAGKVEAEVKRLHTLIVDI
NSHKLKAQQDKLDQINTQLDECSSAITKAQVAIKTAGRNLKKSEDSVSQLEKEIGENEKL
MEELTEQLKNLEEQAGEVMQTYQQAEEALPEVQEQHRGVLQEIKALQEQEHALQKESLNV
RLKVEHIDTAITECHNKIKHWEKEASKLSLHPIDDAPTEELPALNPEQLEDLGNPDVIKN
EIALLEDRCSNMKPNLGAIAEFKKKEELYLQRVAELDDITTQRDAFKRGCEDLRKQRLHE
FMAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGG
EKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNN
MFEMADRLIGIYKTHNTTKNVAINPKTIVLREIETA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgaaaacaaccaagagctcgacggccgctaagagagcggcggaggcgcgggac
gattccgacgatgagcagcccgccgcccgcaaacccaccagctccgccgcctccgcggag
agcagcacaccgccccgcctcgacgatgcggctccgggcgagtctgctgaggagctggat
aaccgcagtctggaggagatcctggccagcatccctccgccgccgcctcccgccatgagc
tccgaacctggcgccccgcgcctcatgatcacacacatcctcaacagaaacttcaagtcc
tacgcaggagagcagattctggggcccttccataagcgcttttcctgtatcatcggtcca
aacggcagcggcaagtccaacgtgatcgactccatgctcttcgtgtttggatacagagct
cagaagatccgctcgaagaagttgtcggttctcatccacagttctgacagtcatccggac
atccagagctgcactgtagaggtgcacttccagaagatcatcgacaaggaaggagacgac
tacgaagtcattcccaacagctcgttcttcgtgtcgagaaccgcggccaaagataactcc
tcctcttatcacgtcaacggcaagaaagcaaccttcaaagatgtgggcaccttactgcgc
agccacggcatcgacctggaccacaaccgcttcctcatcctgcagggtgaggtggagcag
attgccatgatgaagcccaaaggacagacggagcacgacgagggcatgctggagtacctg
gaggacatcatcggctcctgccgtctcaaagagcccatcaacaccctgtgccggcgggtg
gagttactgaacgagcagcgaggagagaagctgaatcgagtgaagctggtggagaaggag
aagagcgctctggagggagagaagaataaagccgtggagttcctcaccctagagaacgac
atcttcaagaagaggaacctcctctgtcagttctacgtgcatgatctacagaagcgtgca
tcggccaaagaagctgagaaacagcagattcaggaggacacaaaggaactgagcgacaaa
agcagccagctgacagaggctttgaagaccaagaacgaggatctgaagggcgtggagaag
aaactgaccaagctgaccaagttcatagagagccagaaggagaaatttacccagctggac
ctgcaggatgtggaggtgcgcgagaaactcaaacacaccaagagcaaaaccaagaaactg
cagaaacagcttcccaaagacaaggagaagctggaggaggtgaggagcgttcctgccagc
agtgagaagatcatcacagaggcgtctgctcagaaggaggagctggagaagaagaagctg
gtggaggagcagaagctggctcaggtgatggagagcctaaaggaggagaccagcggccta
caggaagataaagagaaaaaagagcaggagcttctggagctgagcaaggcggtgaacgag
acgcgttcacggatggatgtggcgcagtcagagctggacatctacctgagtcagcacaac
accgctgtgaaccagctcaaccaggccaaaaacgccctgcaggaggctgtggacacgctc
agagagaggaaagccaccatcaaagacctcaacgtcaagataccgcagtgtgaggagcag
ctcaagaaggacgagcaagagctggagcagatctctgagcaggaccggcagaagcgagtg
caggttggagacatgagacagaaggtggctgaggccaagagctctctgtccaccaaccgc
agccgcaacaaagtgctggacgctctcatgcagcagaaacgatctggaaagatcccgggc
atcatgggacggctgggtgatctgggagctattgatgagaaatacgacatcgccatctcc
tccagctgcggctcgctggataacattctagtggacaccattgacacggcgcagaaatgc
gtcacgttcctgaagacccagaacatcggtgtggccacattcatcggtctagacaagatg
aaagtgtggcagcagaacatgggctccatctccactccggagaacatccctcgtctgttt
gacatggtgcgggtgaaggacgagagcgtgaggccggcgttctacttcgctctcagggat
acgctggtggccaaagacctggagcaggccacgcgggtggcgttccagaaggacaagcgc
tggagggtggtcacgctgcaggggcagatcatcgagcaggccggtaccatgactggagga
ggaggacgagtgatgaagggcaggatgggctcctcggtctgtgctgatttcactcaggaa
cagctggataaaatggagagcgatttgaacaaagaggtgacgcagctgcaagactggcag
cagaggaagcaacagctggaggagaaggtgcacaaagccagacgtgagctgagagacatg
aagaacacgctagagacatacacagccaccatccagagcctgacagagcaggagctgcat
ctcaagactcagatgaaggatctggaggccaatgtcatctccgctgcacctgataaagcc
aagcagaagcagatggagaagagcctggaggcctacaggaaagactttgaggcagcgtcc
actaaagcaggaaaggtggaggcggaggtgaagaggctgcacacgctcatcgtggacatc
aacagtcataagctgaaggcccagcaggacaaactggaccagatcaacacacagctggac
gagtgctcctcagccatcaccaaagcccaggtggccatcaagactgccggacgtaatctg
aagaagtctgaggacagcgtgtctcagctggagaaggagatcggtgagaatgagaagctg
atggaggagctgacggagcagctgaagaacctggaggagcaggcgggagaggtcatgcag
acgtaccagcaggctgaggaagctctgccagaggttcaggagcagcatcgtggagtcctg
caggagatcaaggccctacaggaacaggagcacgcgctgcagaaggagtctttgaatgtg
cggctgaaggtggagcacatcgacacggccatcactgagtgccacaacaagatcaaacac
tgggagaaagaggccagcaagttgtctctgcaccccatcgatgacgctccaacagaagag
ctgcctgcactgaacccagagcagctggaagacctgggcaatccagacgtcatcaagaac
gagatcgctctgctggaggaccgctgttccaacatgaagcccaacctgggagccatcgct
gagttcaagaagaaggaggagctgtatctgcagagggtggcggagctggacgacattacc
acacagagagacgccttcaagaggggctgcgaggacctgcgcaagcagaggctgcacgag
ttcatggctggattcaacatcatcaccaacaaactgaaggagaactaccagatgctcacc
ttaggaggagacgccgagctcgagctggtggacagtctggatcccttctctgagggcatc
atgttcagtgtgcgtcctcctaagaagagctggaagaagatctataacctgtcaggagga
gagaagacgctcagctctctggctctggtgtttgcgctgcatcacttcaagcccacgccg
ctctacttcatggacgagatcgacgccgccctcgacttcaagaacgtctccatcgtggcc
tgttacatatacgagcaaaccaagaacgctcagtttatcatcatctccctgaggaacaac
atgttcgagatggccgaccgtctcatcggcatctataagacgcacaacaccaccaagaac
gtggccatcaaccccaaaaccatcgtcctgcgtgagatcgagacggcctga
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