Garra rufa (doctor fish): 141285197 Help Entry 141285197         CDS       T11039                                  Symbol dchs1a Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism grf  Garra rufa (doctor fish) Brite KEGG Orthology (KO) [BR:grf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:grf04515]     141285197 (dchs1a) Cell adhesion molecules [BR:grf04515]  Cadherins   Cadherin related    141285197 (dchs1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 Fibulin_C RIFIN CADH_Y-type_LIR TMEM154 DUF960 Motif Other DBs NCBI-GeneID:  141285197 NCBI-ProteinID:  XP_073674342 LinkDB All DBs Position 14:13968426..14100329 Genome browser AA seq 2972 aa AA seqDB search MNHLRWHCIYPGTKTNQILSHSDTTRWNHMTAETQISSTANQNKREYTQVIPEVAFPGTF VVQVTARDKDQGPNGDVQYSILQNEGTHSDWFSVDAVTGIVTTLTQLDYETDPTPSVTVV AADRGRPPLSSTAVVKVILQDINDNEPVFGSKFYNASIKENAAAGTCFMEGSAVSLERLH GALPRNVVFNDSTFIFLKSSSAPLKEAGGGEWMRDGHIVMVNIPSESRGNPSWGHTHNRI KGPPRFFQHPPAPFLRTVQCDGHNAVLGNPESVHLKCPMRKYQDIPRLVTATDADGGSFG SISYSLGSGPGSVTPSQFTVGKHNGQICTTTSLDRDQGPANYDFTITAVDGGGLSSMAYV RVDLIDINDNRPAFYPLSYAVSLSTQSTPGTSVLKVTAHDPDAGENGRVTYRTVPGGSSP FFTLNKDTGVISLSRALHGKANSVITMVVSAQDGGGLTAPVNARVNISIVAGLVAPPVFE QSQYFFVVSEDALRGTQVGIVRASTKNGVSKDISYTISSGDPTGYFTIDSETGALRTSLP LDHEAQPSLNLEVQAHCGNPPAFGQTRVRITVSDVNDNAPVFLPSSSESLILPEDTRMGT VVYKVQAEDHDSGPNGLLSFDLFTGGAQRTFSIDRNSGQIRLIGSLSYETMPRYDLQVIA KDSGAPQLSSTFTLVIHVQAENGQGPVFDSLTYRVELKESMPLNTRFLQVRAVNRDGGIT AGPSSPSSAPLAYHLHPDGDAAGFGIVSDSGWLFVKSALDREAKEMYLLTVLATSGNGQL KKTGSATVRVSVMDENDNTPRFTQERAFLAVRENLPAGTGFGRVSASDRDAGLNGRLSYR LLHLDRHFQINSHTGEISTKLSLDRELQSSYQLMVVAQDGGTPPRSATGTAFITVLDEND NAPSFSHAGRELLLQALEGQPSGFLLGTIHAKDPDEGENGTIFYSMSGPRAERFTLNPNT GELRSSSPLSHSERPEYNFIVLASDRGSPPQSSTIALKIQVVSSNKGSPTTNSQPITLNS VEGAKPGSVVGSVRSPDSQTLPEVGQVTYAVVGGTDCDGTFVVDRQTGDVYLARELDFEK APRYTLQIEVDDFSMPLPKSHFVTLVIDVQDSNDHAPEFPEDPIIIVVPESTDPGSSIYT FQAIDKDGSGPNSEVHYSILQQWPNVPDLLFLDPTTGVLSLGMMLDHERTSSMLLVVQAM DSAPDVSQRRRGTVTARIFVTDVNDNDPVFISPSVVSVMEDQPVGFVVVYVMAVDADQGE NGRVTYRIQSGNTGGKFSLNPDTGSLSILRPIDREEQDLYNLTIVAEDHGLQQHSSSQIL SIQVIDVNDEAPYFEESEYEAFIAENQPVGTTVLVVSASDLDQGTNGIVTYGSIVGDDFS IHPVTGVITTTKALDREAQGVYAVTVYARDGGSPPNFAKTTVRVAVLDENDNRPVFGRVY YSLEVPENQEPLTLFTIRATDQDSGDGGLVHYKITDGDHFGDFRLDRKSGVLSTSRSLDR ESKAKYTLTVEAQDQGIPSLTSTVTLDISVLDLNDNSPVFPSNSYFVEVSEDASEGSLVL DVSASDKDEGSNSQVVYFLSRESKGMFIVDQHTGRIITAAVLDREKVASYSFQVYAMDSS ASNPRNTSAEVTVHILDVNDNAPFFITDPLIINVSSSSLSNHKVLATMRAEDKDFGANGS VFYRFANPVKGFTINSLTGDIQATERLHALTQSQRTLIVEAMDQGNPSQSSLGVVIVYIK EQSYQGIRFTRNTRDVSLQENAAKGTAVVQIQAHYPDGSSSGINYSIFSGNKQQSFSISP HTGEIWVESSKALDFEETPRLRLVVKAETASYSSFMAVNLLLQDVNDNLPRFQLHNYIAY VREAQGYDHPIIQVLANDLDQGQNGQVTYSIRSSSMSGLFKIDPITGSISTAAIMDREIW TQTNLVIMATDRGSPRLAGSATLTVIIVDLNDNSPTIPVPREVQVPENTLIGTVITQVTG NDVDSGPALSYSLLLDSDTQGKFGIHRYGGGVSLTAPLDFEDRTWYTLTVSSSDSKQQSY ANLTVLVEDVNDNAPVFSQDLYEVTLAEHSPAGSSVITVTATDKDSGENGRITYRVVSTK DMFYIDPSNGTLFIKQKVEFDSQRPSILVVIEASDSGTPPMTALTTVQVHVSDINDNAPV FHQTEYRASVSEDEVPGSTILTLEAVDGDLSRDNCGFDFAIASGNIGNAFQIESSVRFLE GHGFQTVGTLILVDKLDFESVNGYNLTIVVSDRGIPQRSSSVPVLITVMDTNDNPPSFSR AEYSVIVNEGAETGKEILQLFAVDPDSTPNGEVQYSISSGDESELFSIDRWTGSLRLRRS LDSEKRSSHVFIIQASDGQGHFALAPVTVEVKNINNNRPYFPLKSLTASIRENQPQNALV TILHAIDHDKGAFGELKYFLIYNSGSGKDSFLVNQTSGEVRTRFTFDFEKANTFNFIAMA MDAGNYSATVTVQVFVTGEDEYDPVFTNSGFAFHVPKGAKKGQSIGQVNANDEDGGVDGI VLYTLANSSPYFEVNTSTGVISLKMDAYHRHMSRSKRETRQMTLDVIAHSPLENSRKASA QVTIDVTHTSFGLNTDMNVVLASAITASLAAIVFLIIVVVVIFLLRSQRHKEQEACTRIV THGTVLESLEDSKVPGGEKMYHQTLPGYATDQTGSGGGTYARGGSLDPSHSSGRGSAEAE AAEDDEIRMINEYPQVSSISSSMQEHIAARGPDSGIQQDADQLSDISCEPGMDANQWFKG KKLASLSGTLLSSQLPTYRDEGGGYLGVGRGLNISHPKDYAFPEDGKPAVDGSLTAIVAS DEELRGSYNWDYLLDWCPQFQPLANVFTEIARLKDENAPPNPRRPFHPKAKTDPKSRIDP PPLITSVAHPGAKTVLPKPAVGRTFPHLSSLRRSPIDHDGSVSSIAMSPSFSPSLSPLAA HSPAIAPFGGHSSSIISTNEHSLEHEETELRI NT seq 8919 nt NT seq  +upstreamnt  +downstreamnt atgaaccacctcagatggcattgcatctacccgggaaccaaaaccaatcagattctgtcc cacagcgacacaacaagatggaaccacatgacagcagaaactcaaattagttctacagca aaccagaacaaacgggaatacacccaggttattccagaggttgcctttccaggaactttt gttgtacaggttacagcacgtgacaaagaccaaggacccaacggagatgttcagtacagc atcctgcagaacgaaggaactcattcagactggttcagtgttgatgcagtcactggtatc gtcaccaccttgacccagctcgattacgaaacggaccctacgccgagtgtaactgtggtt gctgctgacaggggtcgaccgcctttgtcttctacggctgtggtcaaagtgatcctacag gatattaatgataacgaaccagtgtttggcagcaagttctacaatgcatccatcaaggaa aacgccgcagcagggacctgtttcatggagggcagtgcagtcagcctcgaaagacttcat ggtgcattgcccagaaacgtggtcttcaatgacagcaccttcatcttcctcaaatcctcc tcggctccattaaaggaagctggaggcggcgaatggatgcgagacggccacattgtgatg gtaaacatcccgtctgaaagcagagggaaccccagctggggtcatacacataaccgcatt aaagggccaccacggttctttcagcatccgccagctccatttctccgcaccgttcagtgc gacggtcacaacgctgtgcttggcaaccctgaaagcgtccacttaaaatgccccatgcgg aagtatcaagacatccctcgtttggttacagctactgatgcggatggtggctcttttggc tccatctcctactctctgggctctggtccaggcagtgtgaccccgtctcagttcaccgtt ggcaagcacaatggacagatctgtacaaccaccagcctggatcgtgaccagggtccagcc aactacgacttcaccatcacagctgtggatgggggtggactgagttcaatggcctatgtg cgtgtggacctgatagacataaatgacaatcgcccagcgttctaccctctgagctatgca gtgagcctgagtacacagagcaccccaggaacctccgtcctgaaggtgactgctcacgac ccagatgctggagagaacggcagagtgacgtaccgtactgtacctggagggagctcgcct ttcttcaccctcaacaaagatactggagtgatttcactgtcgcgcgctctacatggaaag gcaaactcagtcattacgatggtggtctcagcccaagatggtgggggtcttactgctcca gtcaatgccagggtcaacatcagcatagtggcaggactggtggccccccctgtgtttgag caaagtcagtacttcttcgtggtctctgaggatgccctacgtggaacacaagttggcatt gtgcgggccagcactaagaacggtgtctcgaaggatatctcctacactattagttctggt gacccaacaggctactttactattgattcggagactggggctttgagaacgagcttgcct ctggatcacgaggcccagcctagcttgaatctggaagttcaggcgcactgcggtaaccct ccagcctttggccagactagagtacgaattacagtgtctgatgtcaacgacaatgcgccc gttttcttgccctcatcttccgagtcactgattctacctgaagacacccggatgggaaca gtggtgtacaaggtccaagcagaggaccatgattctggacccaatggtcttctgagtttt gacctgttcaccggcggtgcccagagaaccttcagcattgatcgcaacagcggacaaatc cgcttgattggcagtttgtcgtacgagaccatgcctcggtatgaccttcaggtgattgcc aaagacagcggagcacctcaattaagttctaccttcaccttggtcattcacgtgcaagct gagaatggccaaggccctgtgttcgatagcctgacgtaccgagtcgagctaaaggaaagc atgcctctcaacacacgcttcctgcaggtacgagctgtaaaccgagacgggggcatcacc gctggaccatcttctccatcttccgccccactagcctaccacctgcacccagacggcgac gctgcagggtttggcatcgtgtctgacagcggctggctgtttgtgaaaagtgccctggac agagaagccaaggagatgtacctgctcactgtactggccacatcaggcaacggacagctg aagaagactggtagtgccacggtacgtgtgtcagtgatggatgaaaatgacaacacccct cggtttacccaagagagagcgtttctggcagtgcgcgagaacctgccggcaggcactggc tttggccgtgtgtctgccagcgatcgggatgctggtctcaacggtcggctgagttaccgc ctgctccatctggatcgacacttccagatcaattcccacacaggtgagataagcacaaaa ctttccctcgaccgtgaacttcagtccagctaccagctcatggtggtggctcaggatggt gggacccctccacgcagcgctacaggcactgctttcatcacagttctagatgagaatgat aatgcaccctccttcagccatgcaggaagagagctcttgctgcaggcgttagaaggtcag ccatctggatttcttctgggaaccattcatgcaaaagaccctgatgaaggagaaaatgga actattttctactccatgtctggtcccagagccgaacgtttcacactgaacccaaacacc ggagagctgcgttcctcttcccctttgagccattcagagcggcctgaatacaatttcatc gttctggcttcagaccgaggttcaccccctcagagctccaccatagcattgaaaattcag gttgtaagctcaaataaaggatcgcccaccactaactcccaaccaataactttgaattca gtggagggagctaaacccggctcagttgtggggtctgttcgttcacctgattctcagact cttcctgaagtaggccaggtcacgtatgctgtggtgggaggcaccgactgtgacggcacc tttgtggtggaccgccagacaggtgacgtttacttggcccgtgagcttgacttcgaaaaa gctcctcgatacactctccagatcgaggttgatgacttctccatgcctctccctaaaagt cattttgttacattggtaatcgatgtccaggacagcaacgatcatgctccagagtttcca gaagaccccattattatagtcgtgcctgagagcacagatcctggttcatccatctacacc ttccaggctattgataaagacggaagtggacccaatagtgaagtacactattccatcctg caacagtggccaaatgtcccagatctgctgttcttggatccaaccacaggagttctttct ctgggaatgatgttggatcatgagaggacctcatcaatgctcttagtggttcaggcgatg gattcggcccccgatgtcagtcagcggcgccgtggaacggtcacagcacggatatttgtc actgatgtgaatgataacgatccggtgtttatctcaccgtctgtggtgagtgtgatggag gaccagcctgtgggctttgtcgtggtttatgtcatggctgtagatgcagaccagggagag aacggacgagtgacgtatcgcatccagagtggcaacaccggaggaaagttcagccttaac ccagatacagggtctttgtctattcttagaccaattgaccgtgaagagcaagacctctac aacctgaccattgtggcagaagaccacggtttacaacagcacagcagctcccagatactg tcaatccaggtgattgacgtgaacgatgaggcgccatactttgaggaaagtgaatatgaa gcgtttattgcagagaatcagcctgtgggaactactgtgcttgtggtttcagcttctgac ttggaccaagggaccaatggaattgtgacatacggaagtattgtaggagatgattttagt attcacccggtgacaggggtcataaccaccaccaaggctttggacagggaagcccaaggg gtttatgctgtgacagtttatgccagagatggtggttctccgcccaatttcgcaaagacc acagtgcgcgtcgcagtgctggatgagaatgacaatagaccggtttttgggagggtgtac tacagtctggaggtgcctgagaaccaggagccgttgacgctcttcaccattagagccaca gatcaagactctggggacggtggactggtgcactacaaaatcactgacggagaccatttt ggtgatttccgcctggacaggaaatcaggtgtgctgtccacttccaggtctttggacaga gagtccaaagcaaagtacaccctcaccgtggaggcacaagatcagggaataccatccctt accagcactgtcactttggacatcagtgtcttggacctgaatgacaacagcccagtgttt cccagcaacagctactttgtggaggtatccgaggatgcatcagaagggtctcttgttctg gatgtttcagcctccgacaaagacgaaggatcaaacagtcaagtggtctacttcctgagc cgcgaatccaaaggcatgtttattgtggaccaacacacaggtcgcattattacagcggca gtcctcgaccgagaaaaagtagcctcctacagtttccaagtctatgccatggactcctca gcctccaacccacgtaacacttcggctgaagtcacggtccacatcttagatgtaaacgac aatgcccccttcttcatcacagacccgctcatcatcaatgtgtccagcagtagtctctcc aaccacaaggtgctggccaccatgagagctgaagataaagactttggtgcaaatggatct gtattttatcggtttgcgaaccctgtcaaaggcttcaccataaactccttgactggggac atccaggccactgagaggctccatgcactgactcagagccagcggactctcattgtggag gccatggatcagggtaacccatcgcagtcctctcttggagttgtgatcgtgtacatcaaa gagcagagttaccagggcatccgctttactcgcaacaccagggatgtcagcctgcaggag aatgctgctaaaggtacagcagttgttcagatccaggctcattatcctgatggatctagc agtggcatcaactatagcattttcagtggcaacaagcagcagtcctttagcatcagccca cacacaggggagatttgggtagaaagctccaaagctctggactttgaggagaccccacga ctccgcctggtggtcaaggctgaaaccgcatcctacagttccttcatggcagtcaacctt ctcctgcaggatgtcaatgacaatttaccacgttttcaacttcacaattacattgcttat gttcgtgaggcccagggctatgatcatcctatcattcaggtgttggcgaatgacctggac cagggtcaaaacgggcaggtgacctactccataaggtcatcgtccatgagtggtctcttc aagatcgaccccatcacaggcagtatatccactgctgccatcatggacagagagatctgg acacagaccaacctggttattatggcaactgacagaggcagtcctcggctagcaggttct gccactctcactgtgatcatcgtagacctgaatgacaacagtcccaccatccctgttcca cgtgaagtccaggtccctgagaatacgttgattggaactgtgatcactcaggttacaggg aatgatgtggactctggacctgctctctcctattcccttcttctggactcagacactcaa ggaaagtttggaatacatcgctatggaggaggggtgtccttaaccgcccctctcgacttt gaagatagaacatggtacacgctgaccgtcagctcttcagactccaagcaacaaagttat gcaaatctgaccgtgcttgtggaggacgtgaatgataatgctccagtcttctcccaggac ctttacgaggtgactctagcagaacactcgccagcaggaagctcagttatcacagtaact gctacagataaggactctggagagaacggaaggataacatacagggtcgtgtcaacaaag gacatgttctacattgacccaagcaatggtactctgttcatcaagcagaaggttgagttt gactcacaacgcccttctattttggtggtgattgaagccagtgatagtggaacacctccg atgactgcccttaccaccgttcaggtgcatgtgtctgacatcaatgacaatgcacctgta ttccaccagactgagtacagagcctctgtgtctgaagacgaagttcctggttcaaccatt ctaaccctggaagccgtagatggggacttatctagagacaactgcgggtttgatttcgcc atcgccagtggaaacattggtaacgccttccaaattgagagcagtgttcgtttccttgag ggccatggatttcagacagttggaacgctgatattagttgacaagcttgactttgagagc gtgaatggctacaatctcactattgtggtctcggaccgcggcataccgcaacgaagctca agtgttccagtattaatcactgtgatggacactaatgataaccctccatccttcagcaga gctgagtacagcgttattgtcaatgaaggcgcagaaacgggaaaagaaatacttcagctt tttgcagtggaccctgactcaacacctaatggagaggttcaatactcaatcagctctgga gacgagtctgagctcttttctatagatcgctggactgggtcccttcgtctgcggaggtct cttgatagtgagaaacggtcctctcatgtgttcatcattcaggcctcagatggtcagggc cacttcgctcttgctcctgtaactgtcgaggtcaagaacatcaataataacaggccttac ttccctcttaaatcactcacagcaagtattcgtgaaaaccagccccagaatgctctagtt accatactacatgccattgatcatgacaaaggagcatttggagaactgaaatatttcctc atttataattccggcagtggtaaagattccttcctagtgaaccaaacctccggtgaggtg cgaacccgctttacattcgacttcgagaaggcaaatactttcaattttattgctatggca atggatgcaggcaactactcagccacagtcacagttcaagtttttgtgactggtgaagat gagtacgaccctgttttcactaactcaggtttcgccttccatgttcccaagggtgccaag aaagggcaaagcatcggtcaagtaaatgctaatgatgaggatggaggagtggatggcatt gtactatacacactcgcaaacagttcgccttactttgaggtcaacacatccacaggagtg atatccctcaagatggatgcatatcatcgacatatgagcaggtccaaaagagagacacgt cagatgacgttggatgttattgcccacagtcctttggagaattcccgaaaagcttctgcc caggtcacgattgatgtcacccatacatccttcggcttgaacacagacatgaatgtggta cttgccagtgccataacagcttccttggcagccattgtgttcctgatcatagttgttgtg gtcatattcctcttgagatcccaaaggcacaaagaacaagaggcttgcaccagaatagta acccacggcaccgttctggagagtcttgaagattcaaaagttccagggggtgaaaagatg tatcatcagactcttcctgggtatgcaacggaccaaactgggagcggaggaggtacctac gcacgaggggggtctcttgacccatctcattccagtggacgtggttcagccgaagctgaa gcagcagaagatgatgagatccggatgattaacgagtatcctcaagtttccagcatctct tcctctatgcaggagcacatagctgctcgtggacccgactctggtatccagcaagatgcg gaccagctgtctgacatttcctgtgagcctggaatggatgcaaaccaatggtttaaaggg aaaaaactggcaagtttaagtgggacactactatcaagccagttgccaacttatcgggat gaaggcggtggatatctcggggttggaagagggcttaacatctcacatccgaaagattat gctttcccggaggatggtaagcctgctgtagatggttctcttacagcaattgtggctagt gacgaggaactgaggggcagctacaactgggattacctcctcgattggtgccctcaattt cagcctctggctaatgtctttacagaaattgccagattaaaagatgagaacgcgccacct aatcctcggcggccatttcatcctaaagcaaagactgatcccaagtccagaattgaccct cctccacttattacttctgtagcacatccaggggccaaaactgttttgccaaaacctgct gtaggccgaacatttcctcacttgtcctcattgcggcgatctcccattgaccatgatggc tctgtttcctcaatagccatgtctccaagtttttctccatcgctttcgcctcttgcagct cattccccagccattgctccttttggaggtcactcgtcctccattatcagtacaaatgag cactccttagaacacgaggagacagaactgaggatttaa

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