KEGG   Garra rufa (doctor fish): 141286675
Entry
141286675         CDS       T11039                                 
Symbol
mib2
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2
  KO
K10645  E3 ubiquitin-protein ligase mind-bomb [EC:2.3.2.27]
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:grf04121]
    141286675 (mib2)
Enzymes [BR:grf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     141286675 (mib2)
Ubiquitin system [BR:grf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    141286675 (mib2)
SSDB
Motif
Pfam: MIB_HERC2 SH3_15 Ank_2 Ank Ank_5 Ank_4 Ank_3 zf-C3HC4_3 ZZ Ank_KRIT1 Sina_RING CUB_A2MG
Other DBs
NCBI-GeneID: 141286675
NCBI-ProteinID: XP_073674845
LinkDB
Position
15:complement(16162647..16266309)
AA seq 1002 aa
MLSTVTPDLSPETPLLGTLPLPAPRPQAATAGLPAAPVPRAHRKHSEAGHSGQPARGSME
VGMRVVRGVDWKWGNQDEGEGHAGTVVEIGRQGSTTTPDKTVVVQWDSGTRTNYRTGYQG
AYDLLLYDNAQIGVRHSNIICDSCKKHGIMGMRWKCKVCFDYDLCTQCYMNNKHDLTHAF
ERYETAHSQPVSLTPRQNLSRIILKGIFQGVKVVRGPDWDWGNQDGGEGKVGKVVDIRGW
DQESGRSVASVTWTNGTTNVYRMGHKGKVDLKYVSDVQGGYYYKEHLPKLGEHAELQRQE
SADSHSFQQGDKVKCLLEVDILRQMQEGHGGWNPKMAEYISRIGTVHRITDRGDVRVQYS
NNIRWTFHPGALTKVNTFAVGELVKVLDDIDSVKRLQVGHGEWTDSMAPALGQVGKVLKV
YADGDLRVAFGGQTWTFNPACLSAQPGEVDANLMTAENSSESGSTVISVLEKLLSQSTEQ
DHPGRLVIEAAHGNAAKVRELVQKYPDKVDIKNQGKTALQVAAHQGHVEVVKVLLQANSS
IEAKDEDGDAALHYTAFGNQAEIARLLLSKGANVNLLNNSMCTALHIAVNKGFTDVVRVL
TEHSADVNLQDSYGDTPLHDAIAKDFRSIIEILTVVPNIDFTQQNNRGFNLLHHAALKGN
KLATEMILARARQLADVKKEDGFSALHLASLNNHRDVAEILLKEGRCDINIRNNRNQTPL
QLAVTQGHVALVALLVTEGADVNAEDEDGDTAMHTALSRQQLATVMSTGEGEGAVLYGRL
CSSGLMGNTELNVGAAIACFLAQEGADINYANHKGKSPLDLVTDSNVQTLIRSFAEKHRL
QAVTCGTGTSSSSLRRVHTTPNTMTNLAMPSVTGPSECLICSELALLVLFSPCQHSVACE
ECAHRMKKCIRCQVTITKKIRQDQTEVECSPSSENSEQHNLLEQLQSRYRQMEERITCPI
CIDNHIKLVFQCGHASCIDCSAALKTCPICRQTIRERIQLFV
NT seq 3009 nt   +upstreamnt  +downstreamnt
atgttgtcgacagtcacccctgatctgtctccagagacccccttactcggaacccttccg
ctcccagcgcctcgaccccaagcagcgaccgctggcctccccgcggcccccgtcccgcga
gctcaccgcaagcacagcgaagcaggccacagcgggcagccggcgcgcggcagcatggag
gtgggcatgcgcgtggtccgcggcgtggactggaagtggggtaaccaggacgaaggagag
gggcatgcgggcacggtggtggagatcggtcggcagggcagcactaccacacccgacaaa
actgtggttgttcagtgggacagcgggacgcgcaccaattaccgcaccggataccaggga
gcctacgacctgctcctgtatgacaacgcacagatcggtgtccgacattcaaacatcatc
tgcgacagctgtaagaagcacggcattatgggaatgcgctggaagtgtaaggtgtgtttc
gattatgacctgtgcacccagtgttacatgaacaacaagcacgacctgacgcacgccttc
gagcgctacgagacggcgcattcgcaaccagtgagcttgacgccaagacagaacctgtcc
agaatcatcctgaaaggaatcttccagggtgtgaaggtggtccggggacctgactgggac
tggggcaaccaagacggaggtgagggtaaggttggaaaggtggtggatattcgtggatgg
gatcaggaatcgggtcgtagcgtggctagtgtcacctggaccaacggaaccacaaatgtc
tacagaatgggccacaagggcaaggtggatctcaaatacgtgtctgatgtgcagggagga
tactactataaggagcatctgcccaaattaggtgaacacgcggagctgcagcggcaggag
agcgcagacagtcactcgtttcagcagggtgataaggtcaagtgtctgctggaggtggac
atcctcagacagatgcaggagggtcacggcggctggaacccaaaaatggcagagtacatc
tccagaatcggcacggtgcacagaataacggaccgcggggacgtgcgggtccagtacagt
aataacatccgctggaccttccacccgggagctctgaccaaggtgaatacatttgccgtg
ggtgagctggtgaaggtgctggatgacatcgacagtgtgaagagacttcaggttggccat
ggagagtggacagacagcatggctccagcgttgggtcaggtcgggaaggttttgaaggtg
tatgcagacggtgacctgcgcgtggcgtttggaggtcagacgtggacctttaaccccgcg
tgtctctcagcccagcctggagaggtcgacgctaatctgatgactgctgagaactccagc
gaatcaggaagtacggtgatttcagtcttggagaagctgctctctcagtccacagagcag
gatcatccgggccggctggttatcgaggcggctcacgggaacgccgctaaagtgcgtgaa
ctggtgcaaaaataccctgacaaggtggatatcaagaaccaggggaagacggctctgcag
gtggccgcccatcagggccacgtggaggtggtgaaggttctccttcaggccaacagcagc
attgaagctaaagacgaggacggagacgccgcgctacattacacagcgttcgggaatcag
gcagaaatcgcacgtttgctgctcagtaaaggagccaatgttaacttgctgaataactcc
atgtgtacggcgcttcacatcgctgtcaataaaggcttcacagatgtggtgagagtgttg
acggagcactcggcagacgtcaacctgcaggattcatatggagatacacccttacatgac
gccattgctaaagacttcaggagcatcattgagattctgactgtggtgcccaacattgat
ttcacacagcagaacaaccgtggctttaacctgctgcaccacgccgctctaaagggcaac
aaactagcgacagagatgatcttggctcgagcacgacagctggctgacgttaagaaggaa
gatggtttctctgctctgcatctggcctccttgaacaaccaccgggatgtagctgagatt
ctcctcaaagagggtcgctgtgacatcaacatccgcaacaatcgcaatcagacgccgctg
cagctggctgtgactcagggtcacgtggctctagtggccctgctggtgacggagggggca
gacgtcaacgcagaggatgaggatggagacacggccatgcacacggctctcagccgccag
cagctggccaccgtcatgagtactggggagggtgaaggcgctgtgctgtacggcaggttg
tgtagctcaggactgatgggaaacacggagctgaatgtaggagctgctatcgcttgcttc
ttggcacaggaaggggccgatatcaattatgccaaccataaaggtaaaagcccactggac
ctggttacagacagcaatgtgcaaactctcatcaggagcttcgcagaaaaacacagactt
caagccgtcacgtgtggcacgggcactagcagcagcagtctcaggcgggtccacactacg
cccaacaccatgaccaacctggccatgcccagtgtgacgggccccagcgagtgcctcatc
tgctccgagctcgcactgctagtactgttttctccttgtcaacacagcgttgcatgcgag
gaatgtgctcacagaatgaagaaatgtatccggtgccaggtgacaataacaaagaaaatt
cgacaagaccagacagaggtggagtgcagccccagctccgagaactcagagcagcataac
ctgctggagcagctgcagtcgcgctaccggcagatggaggagcgcatcacgtgccccatc
tgcatcgacaaccacatcaagctggtgttccagtgcggccacgcctcctgcatcgactgc
agcgccgcactcaaaacctgccccatctgccgacagaccatccgcgagaggatccagctg
ttcgtctga

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