Garra rufa (doctor fish): 141286688
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Entry
141286688 CDS
T11039
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
grf Garra rufa (doctor fish)
Pathway
grf03272
Virion - Hepatitis viruses
grf04382
Cornified envelope formation
grf04514
Cell adhesion molecules
grf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
141286688 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141286688 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141286688 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141286688 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
grf03037
]
141286688 (cldn5a)
04147 Exosome [BR:
grf04147
]
141286688 (cldn5a)
04515 Cell adhesion molecules [BR:
grf04515
]
141286688 (cldn5a)
Cilium and associated proteins [BR:
grf03037
]
Other cilia and associated proteins
Stereociliary proteins
141286688 (cldn5a)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
141286688 (cldn5a)
Exosomal proteins of colorectal cancer cells
141286688 (cldn5a)
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
L1 family
141286688 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Clc-like
L_HMGIC_fpl
DUF1129
Motif
Other DBs
NCBI-GeneID:
141286688
NCBI-ProteinID:
XP_073674862
LinkDB
All DBs
Position
15:complement(40150832..40153380)
Genome browser
AA seq
215 aa
AA seq
DB search
MASAALEILGLTLCVFGTLLEMTACGLPTWKVTAYIEANIVVAQTIWDGLWMSCAVQSTG
QMQCKMHDSMLALSHDLQAARALTVISSVMCVVGLMVVIAGAQCTNCIKTESVKARVVNV
GGVIYLISAIFMLVPLCWMANNIISDFYNPQVPSAKKREIGAALYIGWAATAMLLLGGSM
LCCSCPSSGSSGYSVKYAPTKRATSNGDYDKRNYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcggctctggagatcctgggtctgaccctgtgcgtcttcggcacgcttttg
gagatgactgcctgcgggctgcccacctggaaggtgaccgcgtacatcgaggccaacatc
gtggtggcgcagaccatctgggacggtctgtggatgtcgtgcgccgtgcagagcaccggc
cagatgcagtgcaagatgcacgactccatgctcgccctcagccacgacctccaagccgcc
cgagcgctcacggtcatctcatccgtcatgtgcgtcgtcgggctgatggtggtgatcgcc
ggcgcgcagtgcaccaactgcatcaagacggagagcgtcaaagcgcgagtggtgaacgtc
ggaggggtcatttacctcatcagcgcaatcttcatgctcgtacccctgtgctggatggcc
aacaacatcatctccgacttctacaacccgcaggtgccctcggccaagaagcgggagatc
ggcgcggcgctctacatcggctgggcggccaccgcgatgctgctactcggagggagcatg
ctctgctgctcgtgcccttcttctggaagctccggctactcggtcaaatacgcgcccacc
aaaagagcaacatccaacggggactatgacaagaggaattacgtttag
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integrated database retrieval system