KEGG   Garra rufa (doctor fish): 141286688
Entry
141286688         CDS       T11039                                 
Symbol
cldn5a
Name
(RefSeq) claudin 5a
  KO
K06087  claudin
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03272  Virion - Hepatitis viruses
grf04382  Cornified envelope formation
grf04514  Cell adhesion molecules
grf04530  Tight junction
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    141286688 (cldn5a)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    141286688 (cldn5a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    141286688 (cldn5a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    141286688 (cldn5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:grf03037]
    141286688 (cldn5a)
   04147 Exosome [BR:grf04147]
    141286688 (cldn5a)
   04515 Cell adhesion molecules [BR:grf04515]
    141286688 (cldn5a)
Cilium and associated proteins [BR:grf03037]
 Other cilia and associated proteins
  Stereociliary proteins
   141286688 (cldn5a)
Exosome [BR:grf04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   141286688 (cldn5a)
  Exosomal proteins of colorectal cancer cells
   141286688 (cldn5a)
Cell adhesion molecules [BR:grf04515]
 Immunoglobulin superfamily
  L1 family
   141286688 (cldn5a)
SSDB
Motif
Pfam: PMP22_Claudin Clc-like L_HMGIC_fpl DUF1129
Other DBs
NCBI-GeneID: 141286688
NCBI-ProteinID: XP_073674862
LinkDB
Position
15:complement(40150832..40153380)
AA seq 215 aa
MASAALEILGLTLCVFGTLLEMTACGLPTWKVTAYIEANIVVAQTIWDGLWMSCAVQSTG
QMQCKMHDSMLALSHDLQAARALTVISSVMCVVGLMVVIAGAQCTNCIKTESVKARVVNV
GGVIYLISAIFMLVPLCWMANNIISDFYNPQVPSAKKREIGAALYIGWAATAMLLLGGSM
LCCSCPSSGSSGYSVKYAPTKRATSNGDYDKRNYV
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcctccgcggctctggagatcctgggtctgaccctgtgcgtcttcggcacgcttttg
gagatgactgcctgcgggctgcccacctggaaggtgaccgcgtacatcgaggccaacatc
gtggtggcgcagaccatctgggacggtctgtggatgtcgtgcgccgtgcagagcaccggc
cagatgcagtgcaagatgcacgactccatgctcgccctcagccacgacctccaagccgcc
cgagcgctcacggtcatctcatccgtcatgtgcgtcgtcgggctgatggtggtgatcgcc
ggcgcgcagtgcaccaactgcatcaagacggagagcgtcaaagcgcgagtggtgaacgtc
ggaggggtcatttacctcatcagcgcaatcttcatgctcgtacccctgtgctggatggcc
aacaacatcatctccgacttctacaacccgcaggtgccctcggccaagaagcgggagatc
ggcgcggcgctctacatcggctgggcggccaccgcgatgctgctactcggagggagcatg
ctctgctgctcgtgcccttcttctggaagctccggctactcggtcaaatacgcgcccacc
aaaagagcaacatccaacggggactatgacaagaggaattacgtttag

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