Garra rufa (doctor fish): 141286698
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Entry
141286698 CDS
T11039
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141286698 (sin3b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
141286698 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
At4g15545_C
mTOR_dom
UL21a
Motif
Other DBs
NCBI-GeneID:
141286698
NCBI-ProteinID:
XP_073674879
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All DBs
Position
15:32833039..32857471
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AA seq
1204 aa
AA seq
DB search
MAKIQARSSTAKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQSP
LSSQVSPGPGGPGGKSTSSSVVSASSSAVAEPGPAPNEAVTSPESIASSSGPPEQSSRLS
LPLPSRESQSQPATTSVSPPTSEPSPVEFDSAISYVNKIKNRFLDNPETYRAFLEILHTY
QKEQLEVKESRGRSTGGMTEDEVFAKVASLFKGQEDLLAEFGQFLPDAKRSLFTGGSLPG
KDSLKKAEDDELNKQSKKRPRPMLLPHMTPLLKKKMKYSCSKDPSFASVGKHGVLREFTF
FDKVRRLLKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLGDKE
LSHAITGLSDRYMEGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTAICKEVLNDTWV
SFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSPE
DQERFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEW
REAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTE
EGGVGQQGRDGSGTGSTSEPHMIFTYEDKQILEDAASLIIYHVKRQPTIHKDDKDHIKRI
IQHFVPDLFFTRRGELSETEEFTDEEAEGEDGTAAGGGVSTPGGQQQLNGDSRRRRCTSP
QSMDTSTPAHGMNPEGEAVDLRDPEAEHQKELDGVYNLFFVNNNWYFFLRLHQTLCSRLL
KVYRQAERQLLEHRAEQNRERLLMGEGRREKANDLAMELRLKQPSEVELEEYYPAFLDMV
RSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNIVRQLQHLVSDEVCLQVTELYLA
ERKRGAAGGNLSSQCVRAAWEASYQWKAERVMAEENCFKVMFIQNKGQVTLTIELLDTEE
AQGDDPLDVQSLSNYMEQYIGTESVCSQTEGYYFKPVFLPRNLRHFRGWQLKQVEAMRCR
REWHRKMGVETAGNLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARRSQHRVARAQHERF
EQWHRGWLSEHVSSSAERNVQDWLMGEEDEDMIPCKTTCVSVQVKGLHVNRYQVHYNSKA
PASP
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcaggctcgcagcagcactgcgaagcaaatcaaccagatccaagacaag
gcctatgtggttcagaagcaagtccagcagcagcactttcagaaactaaaggtggaagat
gccttatcttacttggaccaagtcaaaatacggttcggaaatgatccaggaatatacaat
aagtttctggatatcatgaaagagtttaaatctcagagcattgacactccaggagttatc
aacagagtttcccagctcttccacgggcatccagaccttgtcctgggttttaatgcattt
ttaccgcctggctatcggatcgaaattcccaaaaatggaatggcatttcttcagtccccg
ttgtcttcacaggtctctcctggaccaggaggaccaggaggaaagagcacgagcagctct
gtggttagtgcctcttcgtcagcagtggccgagcccgggccggctccgaatgaagctgtg
acctctccggagagcattgcttcatcgtctggacctccagaacaatcaagccggttgtca
cttcctctgcccagcagagagagccaatcccagccagccaccacgtcagtgtcccctccc
acatcagagcccagtcctgtggagtttgacagcgccatcagctatgtcaataagatcaaa
aaccgatttttggacaacccagaaacctaccgggccttccttgaaattctacatacatac
cagaaggagcagctggaggtaaaggagagcagagggcgtagcactggaggaatgaccgaa
gatgaggttttcgctaaagtggcaagcctttttaaaggtcaagaggatctgcttgcggag
tttgggcagtttttgccagatgctaagagatctctgtttactggaggttctttgcctggc
aaagacagtctgaagaaagcagaggacgatgaattgaataaacagagcaagaagagacct
agacccatgttattgccccacatgaccccacttctgaagaaaaaaatgaagtattcctgt
tccaaggacccatcgtttgcctctgtcggaaagcatggagtcttgcgggaattcacattc
tttgacaaggttcgccgtctgctgaagagtcaggaggtgtacgagaatttcttacgctgt
atagctctgttcaatcaggaagtggtttcaggggccgaactcctgcagcttgtgactcca
ttcttggggaagtttccagaactgtacacccagtttaagtcatttttgggtgataaagag
ctgtctcatgctatcacgggcctctctgaccgctacatggagggcggaggcagagaagtg
gattacgcctcctgtaaacgcctgggttccagctacagagcgcttcccaagacctaccag
cagcccaaatgcagtggccgaactgctatatgcaaagaggtgctgaatgatacctgggtc
tcattcccttcctggtcagaagactccacttttgtgagttccaagaaaacaccatatgaa
gagcagcttcatcgctgtgaggatgagaggtttgagctggatgttgtgcttgagactaat
ttggcaacaataagagttttggaaagcgtgcagaagaaactgtcccgcctttcgccggag
gatcaagagcgtttccgattggacgactgtctaggtggaacttctgaggtcatccagcgg
cgtgcaatctatcgtatttacggcgacaaggctccagagatcatagaggggttgaagaga
agtccagccactgcagttcctgtcgtactcaaaagattgaaagcaaaagaggaggagtgg
agggaggcccagcagggcttcaacaaaatctggagagagcaatatgagaaggcgtatctg
aaatcactggaccaccagggtgttaacttcaaacagaacgacatgaaggctcttcgatcc
aagagtcttctcaatgaaatagagagcatctatgatgagcggcaagagcagagcacagaa
gagggcggcgtgggccagcaaggtcgtgacggctcgggcacaggttcgaccagcgaaccc
cacatgatcttcacctatgaagacaaacagatcctagaggacgccgcctcactcatcatc
taccatgtcaaacggcaacccaccatccacaaggacgacaaggaccacatcaagcgtatc
atccagcacttcgtccccgacctctttttcacccgtcgtggagagcttagtgaaacagag
gagttcacggacgaggaggccgagggtgaagatggcaccgccgcaggaggcggagtctca
acaccaggtggccagcaacagctgaacggcgattctagacgaaggcggtgtacttctcct
cagagcatggacacctcgacgcccgcccacggcatgaatccagaaggggaggcagtggat
ctgcgcgacccggaggctgagcaccagaaggagctggatggagtctacaacctgttcttc
gtcaataataactggtacttcttcctgcggctgcaccagactctgtgctcgcggctgctg
aaggtttacaggcaggctgagagacagttactggagcacagggcagagcagaatcgggag
cggttgctcatgggagaggggcgcagagaaaaggcaaacgacctggccatggagctgcgt
ctgaaacagcccagtgaagtagagttagaggaatattacccagcgttcttagacatggta
cgcagcctactggatggaaacctggagtccacacagtatgaagacaccctgagagagatg
tttaccatccacgcttacatcggatttaccatcgacaagctcattcagaacatcgtaaga
cagcttcagcacctggtcagtgatgaggtgtgtctgcaagtcactgagctgtacctggcc
gagaggaaaaggggcgccgctggtggcaatctttcttcccagtgtgtccgtgccgcttgg
gaggccagctaccaatggaaggctgagagagtcatggctgaggaaaactgcttcaaggtc
atgttcattcaaaacaaaggtcaggtgaccttaacaattgagttgctggacacggaggag
gcccagggcgatgacccactggatgttcagagcctgtctaattatatggagcagtatata
ggaactgagtctgtttgctctcagacagaaggatactacttcaagcctgtgtttctaccc
aggaatctaaggcattttcgtggctggcagctcaagcaagtggaagccatgcgctgccgg
agagagtggcatcggaagatgggtgtggagacagccgggaacctggactgccgttttaaa
ctcaacacgcacaagatggtgtttgtgatgaactccgaagactacatgtaccgccgaggg
gccctggttaaagctcggaggtcccagcacagagtagcgcgggcccagcacgagcgcttt
gagcagtggcaccggggctggttgagcgagcatgtgtcgtcctctgccgagcgcaacgtg
caggactggctcatgggagaagaggatgaggacatgatcccctgcaagaccacctgcgtg
tctgtgcaggtcaaaggcttacatgtcaacaggtaccaggtgcactacaacagcaaggcc
cccgcctcaccgtaa
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integrated database retrieval system
