KEGG   Garra rufa (doctor fish): 141286823
Entry
141286823         CDS       T11039                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf00310  Lysine degradation
grf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:grf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    141286823 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:grf04147]
    141286823 (plod1a)
Enzymes [BR:grf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     141286823 (plod1a)
Exosome [BR:grf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   141286823 (plod1a)
SSDB
Motif
Pfam: 2OG-FeII_Oxy 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 141286823
NCBI-ProteinID: XP_073675029
LinkDB
Position
15:complement(8712261..8736397)
AA seq 730 aa
MRGVLVALACLLASFARLDCNQQGLIPTEDLLVLTVATQETDGFRRFLRSVKHFNYTVKV
LGRGETWKGGDYMSAPGGGQKVRLLKSALEDIQEENKVILFVDSYDVIFSSGPKELLKKF
QQAKHKVVFSAETLIWPDRHLEDKHPHVREGKRFLGAGGFIGYAPNLKQMVSDWSGADSD
SDQLYFTKIYINPDKRKSINITLDSKCRLFQNLHGALDEVVLKFEDGRVRARNVFYDTLP
VIIHGNGPTKLQINYLGNYIPNVWTFENGCTICKENLRPLSGLQESEYPVVVIGIFIQQP
TPFVTVFFERLLNLKYPKNRLQLFIYNQEPHHELHVLTFLKHHESEYLGVKMIGPEEDID
PVTSRNIGFDMCRDDIDCEYFFSIDIDVVLKNEDTLRILIELNKPFITPMMTKPGRLWTN
FWGALSADGYYARSEDYVEIAQERRMGLWNVPYVSSIFLIKADTLRTDLKDPDLFESATL
DPDMAFCSKVRNKGVFMFVTNMHTFGRVLSTENYQTNHLHNDLWQIFENPVEWEERYIHE
NYSKVLKNDFIETPCPDVYWFPVFTDVACKHFIEEMENFGQWSGGGNVDNRIQGGYENVP
TIDIHMNQVGYEKEWHKFLLDYVAPVTEKMFPGYYTRAQFDLAFVVRYKPDEQPSLRPHH
DASTFTINIALNQVGIDYMGGGCRFLRYNCSIKAPRRGWALMHPGRLTHYHEGLPTVEGV
RYIAVSFVDP
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgagaggagttctggtcgccctcgcctgtttgttggcgtcctttgctcggcttgactgc
aatcaacaaggcttgatccccaccgaggatcttctagtgctgactgtagccacgcaggag
actgatggcttcagacgcttcttgagatccgtcaaacacttcaattacaccgtcaaggtt
ctcggaaggggtgaaacatggaaaggtggagattacatgtctgctccaggtggagggcag
aaagtgcgcctgctgaaatctgctctggaggacatccaggaggagaacaaagtcatcctc
tttgtggatagctatgacgtgatcttttcttctggtccgaaagagctgctgaagaagttt
cagcaggccaaacacaaagttgtgttttctgccgagacgctcatctggccagaccgtcac
ctggaagacaagcatcctcatgtcagagaaggaaagaggttccttggagcaggaggcttc
attggctatgcacctaatcttaaacagatggtttcagactggtcaggagcagatagtgac
agcgaccaactctatttcaccaagatatatatcaacccggataaaagaaagtctataaat
ataactctggacagcaagtgcagattgttccagaatcttcatggagctcttgatgaggtc
gtgctgaagtttgaagatggacgtgtgcgagccagaaatgtgttttacgacacgttaccc
gttattatccacggcaatggacccaccaaacttcagataaactacctaggaaattatatc
ccaaatgtgtggacatttgaaaatggctgcacaatatgtaaggagaatctgcgacctctt
tctggactccaggagagtgaatatcctgtggtggtgattggcattttcatccagcagccc
acaccctttgtcacagtgttctttgagcgcttgcttaacctcaaataccccaaaaaccgg
ctccaattattcatctataatcaggaaccacaccacgaactacacgtactcacatttctc
aaacatcacgagtctgaatacctgggtgtgaagatgattggaccagaggaggatatagat
cctgtgacctcacgaaatattggcttcgatatgtgtcgagacgacattgactgtgaatac
ttcttcagcatagacatagatgtggttttaaagaatgaagacacacttagaatccttatt
gagctcaacaagccttttattacaccaatgatgaccaaacccgggcgtctgtggacaaac
ttctggggtgctctcagtgcggacgggtactacgccaggtcagaggattacgtggaaata
gctcaagaacgcagaatgggtttgtggaatgtgccatacgtctctagcatattcctgata
aaagccgatacattgaggactgacctcaaagatcccgacctgtttgaatccgcaacgctt
gatccggatatggccttctgctccaaagttcgaaacaagggtgttttcatgtttgtaaca
aatatgcacactttcggacgagttttatcaactgaaaattaccagacaaaccacctgcac
aatgatctctggcagatctttgaaaatcctgtggaatgggaggaaagatacattcatgag
aattattccaaagtcttgaaaaatgattttatagaaacaccatgccctgatgtgtactgg
ttccctgtgttcaccgatgtggcctgcaaacatttcattgaagagatggaaaattttggc
cagtggtcaggaggtggaaatgtggacaataggattcaaggtggatacgaaaacgtcccc
actattgatatccacatgaatcaggtgggctacgaaaaagaatggcacaagttccttttg
gattatgtagctccggtcactgaaaaaatgtttccaggatactacactagggctcagttt
gacctggcgtttgtagtcagatataaacctgatgaacaaccctcattaagaccacatcat
gatgcctctaccttcactatcaacatagcgcttaatcaagtggggattgactatatgggg
ggcggctgccggttcttgaggtacaactgctccattaaagctcccaggaggggctgggca
ctcatgcaccctggacgcctcactcactaccatgagggtctgcccactgtagagggggtc
agatacatcgccgtctcattcgtggacccttga

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