Garra rufa (doctor fish): 141286827
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Entry
141286827 CDS
T11039
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
grf Garra rufa (doctor fish)
Pathway
grf03272
Virion - Hepatitis viruses
grf04382
Cornified envelope formation
grf04514
Cell adhesion molecules
grf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
141286827
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141286827
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141286827
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141286827
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141286827
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141286827
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Spectrin_Anc-1
DASH_Dad1
DASH_Dad2
MapZ_EC1
FapA
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
141286827
NCBI-ProteinID:
XP_073675036
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All DBs
Position
15:33392354..33417909
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AA seq
534 aa
AA seq
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MFEKQPYDSPPMYTPPSNGFGPPGSFQDPRSEFDPYPQPPGSYYVGEEVPQHFYKWFSPP
GIVKIMMGTVIIFCLGIFACVASTLVWDTQYGYGYGSGYSGYPGYGSGYGGGYGGGYGGG
YGGGYGGGYGGYYNSYPTPYSAKTTMIAIAAINFIVALGFFAATFSKTNTFRSRKFYLAV
LVVSSIMAVIQGIINIVYIVGVNPMAQSSTSSYYNPMLLMCQNLYGSGVSGMGAGFPIYN
QYLYHYCYVDPQEAVAMVCGFLVVVALAVAAFFSYKTRSKIWHYGKPNIYWDPPLMAGTE
GRDVEEWVNHVQDGQSVQEASMVFSEKMAPVLASAPSVGSIPLKTGSVFSSETHNVIGYP
ERSFSRPSHSTSPSGEVSSSPSDQTDTIRKPSASRSKRRRRNPELDESQYETEYTTGGET
ANDFDEDLWTRLYPEITSDPQRHEYKKEFDSDLRTYKELCTEMDDINDQINKLSRELDTL
EEGTSKYQAVAEEYNRLKDVKRMPDYQNKKHQCRKLRHKLFHIKRMVKIYDRRQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaaacaaccctacgatagtccccccatgtacacccctccttccaatggcttt
ggaccgccggggagcttccaagacccacggagtgaattcgacccctaccctcaacctcca
ggatcctactatgtgggcgaggaggtgcctcagcatttctacaaatggttctcccctcca
ggaattgtgaagattatgatgggaaccgttataatcttctgtctgggaattttcgcctgt
gtggcctcaactctggtttgggacacgcagtacggatatggttacggatctggatattcc
ggctatcctggatacggcagcggatacggaggtggatatggaggtggatacggaggtgga
tatggaggtggatatggaggtggatacggaggctactacaattcttacccgaccccttac
tcagcgaagaccaccatgatcgccatcgccgccataaacttcatcgtcgctttgggattc
ttcgcagccaccttctccaaaacaaacacgttccgcagcaggaagttctacctggcggtg
cttgttgtctcttctataatggctgtgattcagggcattataaacattgtgtacattgta
ggagtgaaccctatggcccaaagctccaccagctcatactacaaccccatgcttctgatg
tgtcagaacctctatggcagcggtgtgtcaggaatgggagccggatttcccatctataac
cagtacttgtaccactactgctacgtggaccctcaagaggctgttgcaatggtttgtggg
ttcttggttgtggtggcactggctgtggcagctttcttctcctataaaaccagaagtaaa
atctggcactacgggaaaccaaacatctactgggatccaccactaatggctggaaccgag
ggcagagatgtggaggaatgggtcaaccatgtacaggatggacagagtgtgcaggaagca
tctatggtgttttcagagaagatggctcctgttctggcttcggcccctagtgttggctct
atccccctaaagactggaagtgtctttagctctgagacccacaatgttatcggttaccct
gagcgctctttcagccggccatctcactccacatccccgtctggagaagtgagctccagc
ccctctgaccagacagacaccatccgcaaaccgtccgcctccagaagcaagagacgcaga
agaaaccctgagctggacgagtcccagtacgaaaccgagtacacaacaggaggagagact
gccaacgattttgacgaggatctatggacacgtctatatccagagatcacatctgacccc
cagcgacacgagtataagaaagagtttgactcggacctcaggacctataaggaactgtgt
accgaaatggacgacatcaacgatcagataaacaagctcagcagagagctagacacactt
gaagagggcacatccaagtaccaggctgtagcagaggaatataatcgtctgaaagacgta
aaacggatgccagattatcaaaacaagaagcaccaatgtcgcaaattgcgccacaagctt
ttccatattaaacgaatggttaagatctacgaccggcgtcagtaa
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