Garra rufa (doctor fish): 141286849
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Entry
141286849 CDS
T11039
Symbol
kcnn1b
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1b isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141286849 (kcnn1b)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
141286849 (kcnn1b)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DExH14_plug
Med9
DUF6775
Seryl_tRNA_N
IRK
Motif
Other DBs
NCBI-GeneID:
141286849
NCBI-ProteinID:
XP_073675062
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Position
15:33329045..33387526
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AA seq
828 aa
AA seq
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MRLVLVKPTNETGLLDSTGAARSERVPDHCNAKRHSAAGEAGMQHRYSGAVHQHHHHHHH
QHAEHRGGPTQTANPLPKQSQESLPSPFSQEAPVKSQGSNPSLADCSKPSLSRQQSVGGA
AKTANCQQDHCSCSCGLQEHQQLLQQQQHHHNPPPSLQLQVQQQRLLRSSLPNCCVRGSG
ELRSQQPSLLQQQQQRDNDSLRSGEQRNLAHHARAWTPDRCQGARNSVSPRSKSSPLSSD
SRLWLEENKHRHEGCKVNADANRLSHAGSRPSLSHGGPQYPQIAMNSCKYNGGIVRPLGS
LGASRRNLAELDSETQPLQTLHTSGLEVVVSKGNGEDPSKQSSENLVRQRPCSAPHKKNK
DIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLIS
LSTVILLCLIIMYHAREIQLFMVDNGADDWRIAMTYERILFIVLELLVCAIHPIPGQYVF
TWTARLAFTYTPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKIN
FNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVHVCERYHDKVEVTSNFLGAMWLISIT
FLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQL
CKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQ
ANTLVDLAKTQNVMYDLVSELQERSEELEKRIGHLETKLDSINSSLQALPGLLSQAIQQQ
QHHLLDGLTQRGFTLTRPSSQTSERSWASSVHRRRSPSTAPHTSSDSG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgtcttggtcaaacctaccaatgaaacgggccttcttgactccaccggggct
gcgcgcagcgaaagggtgccggatcattgcaacgcaaagcggcactccgccgcaggtgag
gcggggatgcagcatcgctactcgggagccgtccatcagcaccaccaccatcaccaccac
caacacgcggagcacaggggtggccctacacagaccgcaaaccccttgccaaaacagagc
caagagagcctgcccagccctttcagtcaggaagcaccagtcaaaagccaagggagcaac
ccaagtctcgcagactgttccaaaccctccctaagtcggcaacagagtgtcggaggggct
gccaaaactgcgaattgccaacaagatcattgttcgtgcagctgcggattgcaagagcat
caacagctgttgcagcagcagcagcatcatcacaaccctccaccttccctccagctacag
gttcagcagcagcggctgctgaggagcagcctccccaactgctgcgtgaggggatccggg
gagctgagaagccagcagccgtctttgctgcagcagcagcagcagcgtgacaacgacagc
ctgagatcaggcgagcagcggaatctagctcatcacgcccgtgcgtggacgcctgataga
tgccagggagccaggaactccgtttcgccgcggagtaaaagcagcccgctgtcttctgac
agtcgcctgtggctcgaggagaataaacacagacacgaaggctgtaaggtgaatgcggat
gccaacaggctgagccatgctggatcgcggccttccctgtcccacggcggcccacagtat
cctcagatagccatgaacagctgcaagtacaatgggggcatagtcagaccactcggcagt
ctgggggcgtcccggaggaacctagcagagctggactctgagacacagcctttgcagacc
ctgcacacttccggcctggaggtggtggtctccaaagggaacggggaagaccctagtaag
cagtccagcgagaacctggtcaggcaaagaccatgcagcgctccgcataagaagaacaag
gacattggctataagctcggacaccggagggcgctgttcgagaaacgcaagcgccttagt
gactacgccctgatttttggaatgtttgggattgttgtcatggtgacggagacggaactc
tcctggggagtttatacaaaggaatcctcatattcatttgcactgaaatgccttattagc
ctctccactgtaattctcctctgtctgatcattatgtaccacgcacgagagattcagctc
ttcatggtggacaatggagcagacgactggcggatagccatgacgtacgagcgtatcctc
ttcatcgttttggagctgctggtgtgtgccatccaccccattccaggtcagtacgtcttc
acctggacggcccgcctggctttcacctacaccccgtctgtggcggatgcagacgtggac
atcatcctctccatccccatgttcctgcggctgtatctgatcggccgggtcatgctcctg
cacagtaagctctttacggacgcctcgtcacgcagtatcggagccctcaataagatcaac
tttaacacacgctttgtcatgaagactttgatgactatctgcccaggcacagtcctgctg
gttttcagcatatcatcatggatcattgctgcctggactgtgcatgtctgtgagagatac
catgataaagtggaagtcaccagtaacttcttgggagccatgtggctaatctccataacc
ttcctgtctattggttatggagacatggtgcctaacacatactgtgggaagggagtgtgt
ctccttactggaattatgggggccggttgcactgccctagtggtggctgttgtagccagg
aagctagaactcaccaaggctgaaaagcatgtccataactttatgatggacactcaactc
tgcaaaagagtgaaaaacacggctgctaatgtactcagggaaacatggctcatctacaaa
cacacaaagcttgtgaagaagatcgaccatgccaaggtccggaaacatcagcgcaagttt
ctgcaggccattcaccaactgcgaagtgtgaagatggagcaaaggaagctgaatgatcaa
gcgaacacgctggtggatttagcaaagacacagaatgtgatgtacgacctggtctcggag
ctgcaggagcgcagtgaggagctggaaaagcggatcggtcacctagagacaaaactggac
tccataaacagcagtctccaggctctgcctggcctgctctcacaagccatacagcagcaa
cagcaccacctgctggacgggctgacccagcgcggattcaccctcacacgaccctcctcg
cagacgtccgaacgctcctgggcgtcatccgtgcaccgacggagatcaccctctactgca
ccacacacgtcctccgatagcggctag
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