Garra rufa (doctor fish): 141286862
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Entry
141286862 CDS
T11039
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf02010
ABC transporters
grf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141286862 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141286862 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141286862 (abcd1)
Enzymes [BR:
grf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
141286862 (abcd1)
Transporters [BR:
grf02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
141286862 (abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
Adeno_IVa2
AAA_23
Spo16_C
Rad17
AAA_29
Mg_chelatase
SMC_N
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
141286862
NCBI-ProteinID:
XP_073675075
LinkDB
All DBs
Position
15:complement(37227977..37250303)
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AA seq
775 aa
AA seq
DB search
MSVYSKLPSKMKKPFVRNTILLLVALYGAKKLSPYLYSKLKGRTSKQVKGSDPVTFNGEP
QELEAAKKKKSSPAVNREFFERLIRLLKILFPRLFCKELGLLGFHSLALISRTFLSIYVA
NLDGQIVKTIVKKDPRAFVVELTKWLLIAIPATFVNSAIRYLEGQLTLAFRTRLVTHAYM
MYFSDQTYYRVSNMDGRLANPDQSLTEDVVMFAGSVAHLYSNLTKPILDVVVTCYTLIKT
GQSKGADTTWPSIIAGVVVALTAKILRAFSPRFGKLVAEEARRKGDLRYMHSRIIANSEE
IAFYGGHKIEMLQLQRSYTALSEQINLILFKRLWYVMLEQFLMKYLWSASGLVMVAVPII
TATGYSKYDSEDVKQAALEMKEEDLVSERTQAFTTARNLLNAAADAVERIMVSYKEVTEL
AGYTARVYEMFEVFEDVRVGEYRRSATEMKPEETGTARKIKHGMRVEGPLQIRGKVIDVE
QGIKCENLPIITPTGDVVVSSLNMQVDGGMHLLITGPNGCGKSSLFRILSGLWPVYSGVL
YKPSPEHMFYIPQRPYMSVGTLRDQVIYPHSLQEMQENGITDQQLEDILKTVNLCYILER
EGGWNAVSDWKDVLSGGEKQRMGMARMFYHKPQYALLDECTSAVSIDVEGKIFEAAKDAG
IALLSITHRPSLWKYHSHLLQFDGEGGWRFEKLDASTRISLQDEKLRLETQLSGIPKMQQ
RLVELCRILGEDSSLPNPGEVEEDDSMEGEREQQKEGEEKERDVVSGGKGKDLME
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtattcaaaactgccctccaagatgaagaagccctttgtgagaaacaccatt
ctccttcttgttgccctttacggggcaaagaaactttccccttacctatatagcaagctc
aaaggaaggactagtaaacaggttaaaggctccgacccggttaccttcaacggagaaccc
caagaattggaagctgccaagaaaaagaaaagctccccggctgtgaaccgtgaattcttc
gagaggttgattcgtctcttgaaaatcctctttcctcggcttttctgcaaagaactcggc
ctgctcggtttccactccctagctctcatttcacgcacctttctctccatctatgtagcc
aatttggatgggcaaatagtgaaaaccattgtgaagaaagaccccagagcatttgtggtt
gagttaaccaaatggctgctcattgccattcccgccacatttgtaaacagtgccatccgt
tacctggagggccagctgaccctcgcttttcgcacccggttggtcacccacgcctacatg
atgtattttagtgatcagacatattatcgtgtcagcaacatggacggcaggctggcgaac
cctgatcagtccttgaccgaagatgtggtgatgttcgctggctctgtggctcatctgtac
tcgaacctgaccaagcccatcctcgatgtagttgtcacctgttacacgctcatcaaaacc
ggccagtcaaaaggtgctgacacaacatggccctccatcatagctggcgttgtggtggca
cttactgccaagattttgagagcgttctcgccccgttttggtaagctggtggccgaggaa
gccaggaggaaaggcgacctgagatacatgcattcacgcattatcgccaattcagaggag
attgccttctatggaggacataagattgagatgttgcagctgcagaggagctacaccgcg
ctgtccgagcagattaacctgatcctgttcaagaggctgtggtatgtcatgctggaacag
ttcctgatgaaatatctctggagcgcatcgggcctggtcatggtcgccgtgcccatcatc
actgccaccggatactctaaatatgattcagaggatgtaaaacaggcagccctcgagatg
aaggaagaagacttggttagtgaacgcacacaggccttcacaacagcccggaaccttttg
aacgccgcagctgatgcagtcgaaaggatcatggtctcctacaaagaggtcacagaactg
gctggatatacggctcgtgtgtatgagatgttcgaggtgtttgaggatgtgcgtgtcgga
gagtaccgccgttcagccacagagatgaagccagaagaaacagggacggctcggaagata
aaacatggcatgagagtggagggaccgctgcagatcagaggcaaggtgattgatgtggaa
cagggcatcaaatgtgaaaacctgcctataataactcctacaggggatgtggtggtttcc
agcctgaacatgcaggttgatggagggatgcatctgctgatcacgggccccaacggttgc
ggaaaaagctctctgttcaggatcttgagcggcctctggcccgtctacagcggagtgctt
tacaagccatcaccggagcacatgttttacatacctcaaaggccttatatgtcggtggga
acgctgagagatcaggtcatctatcctcactctcttcaggagatgcaggagaatggcatc
actgaccagcagctggaggacatcctcaaaactgtgaacctctgctacatcctggagaga
gaagggggttggaacgcagtgagcgactggaaggacgtgttgtctggaggagaaaagcag
cggatgggcatggccaggatgttttaccataagcctcaatacgccctcctggatgagtgc
acgagtgctgtgagtattgatgtggagggcaaaatctttgaagctgcaaaggatgctggg
attgcgcttctctctattacacaccgtccttctctctggaagtaccactcccacctgctg
cagtttgatggcgagggcggctggcgctttgaaaagctggacgcctccacgcgcatttcc
ctgcaggacgaaaagctccggctcgagacccagctctcgggaattcccaagatgcagcag
cggctggtagagctgtgccgcattctgggggaggacagcagtctgccgaacccaggggaa
gtggaggaggacgacagtatggagggagagagggagcaacagaaggagggggaggagaag
gagagagatgtggtatctggtggaaaagggaaagaccttatggagtga
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