Garra rufa (doctor fish): 141286883
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Entry
141286883 CDS
T11039
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00310
Lysine degradation
grf00514
Other types of O-glycan biosynthesis
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
141286883 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
141286883 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141286883 (colgalt2b)
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
141286883 (colgalt2b)
Glycosyltransferases [BR:
grf01003
]
O-Glycan biosynthesis
O-linked Gal type
141286883 (colgalt2b)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
141286883
NCBI-ProteinID:
XP_073675098
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Position
15:28752932..28775418
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AA seq
613 aa
AA seq
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MPAEGFVMVAVICALMAQNCRGELVAHVQDLNPVPESSLLKPKVMIAILARNSAHSLPYY
LGCIDRLDYPKDRIAIWAATDHNVDNTTAMLREWLKNRQSRYHYIEWRPMEEPRSYTDEW
GPKHWAPSRFNHVMKLRQAALKAARERWADFILFVDSDNLLTNPRVLDLMMAENFTLVAP
MLDSRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFSVPMVHSTFLLDLRRSATLDM
AFHPPHPDYSWAFDDIMVFAFSAREAGVQMYVCNREHYGFLPVPLKAQQSVEDEEESFTH
TITEAMIDHNIKPSEFLFTLPKPQDKMGFDEIFLINLKRRLDRRERMLNTLAVLGVEATL
VDAVDGKALNTSQLQALGIEMIPGYKDPYSGRVLTRGEIGCFLSHHFIWKQVVERDLQHV
LVLEDDVRFEPRFKRRLQTIMEDVEKVQLNWDLIYVGRKRMQVAQPEVSVEGVNNLVEAD
YSYWTLGYALSQQGAKKLLAAQPFGKMLPVDEFLPVMFNKHPNAAYMSHFDPRDLRAFSV
EPLLLYPTHYTGEPGYFSDTETSTIWDDEAINTDWDRQYAAKTAQQGQIHSVAQNSVTGD
TPPPASRASRDEL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgagggattcgtgatggtggctgtgatttgcgctctgatggcgcaaaactgc
cgtggagagcttgtggctcatgtgcaggacctgaatcccgtgcccgagtcctccctgctc
aagcccaaagtcatgatcgcgattctggctcggaactctgcgcacagcctgccgtactac
ctgggctgcatcgaccgcctggactacccgaaggaccggattgcgatatgggctgcaact
gaccataatgtggacaacaccacagccatgctgagggaatggctgaagaacaggcagagc
agataccattacattgagtggaggcccatggaggagccacggtcatacacggatgagtgg
gggccgaaacattgggctccatctcgtttcaatcatgtaatgaagctcaggcaggcggca
ctaaaggctgcacgagagcgctgggctgattttattctgtttgtggacagtgataacctc
ctgaccaacccacgggtgctggatctcatgatggcagagaatttcacattggtggcaccc
atgttggattctcgatccctctactcaaacttctggtgtggaatcacgcctcagggatat
tacaagcgcaccccagactaccagcctatccgtgaatggaagcgtttgggctgtttctca
gtccccatggtgcactccaccttcctgttggatctgaggcgcagcgccacactcgacatg
gcttttcaccctcctcaccctgactacagctgggcgtttgatgacattatggtctttgct
ttctctgcacgagaagctggcgtacagatgtatgtgtgtaacagagaacattacggtttt
ctgcctgtacctctgaaggcccagcagagtgtggaagatgaggaggagagtttcacacac
accatcactgaggccatgattgatcataacataaaaccttctgagtttctcttcactcta
cccaaaccccaggacaagatgggctttgacgagatctttctgattaatctgaagcggagg
ttggaccggagggaacgaatgttgaacacattggcagtgctgggagttgaggccacgctg
gttgatgctgtagatgggaaggctctgaatacatctcagcttcaagctctgggtatagaa
atgataccgggatataaagatccatactctggaagggtgttgacgcgtggagagatcggc
tgttttctcagccaccacttcatctggaaacaggtggtggagagggatctgcagcatgtg
ctggtgttggaggatgatgtgaggtttgagcctcgatttaaaaggaggttacagaccatc
atggaggatgttgaaaaagttcagctgaactgggacctcatatatgtgggccggaagcgg
atgcaagtagctcagcctgaggtatccgtagagggcgtgaataatctggtggaggctgat
tactcatattggactctaggttatgccctttcacagcagggcgcaaagaaactccttgca
gctcagccattcggcaaaatgctccctgttgatgagttcctgccagtcatgttcaacaaa
cacccaaatgcggcatacatgtctcactttgatcccagagatctgcgtgctttctctgtt
gagccgctgctgttgtacccaacacactatacgggcgagccgggttacttcagtgacaca
gagacctccactatttgggatgacgaggccatcaacacagactgggacagacagtatgct
gctaaaactgcccagcagggacaaattcattccgtcgctcaaaacagcgtcaccggggac
acaccaccgcctgcgtcccgagcctcacgagacgaactctga
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