Garra rufa (doctor fish): 141286924
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Entry
141286924 CDS
T11039
Symbol
dhx37
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
grf03009
]
141286924 (dhx37)
Enzymes [BR:
grf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141286924 (dhx37)
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
90S particles
Helicases
141286924 (dhx37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
HA2_N
AAA_19
ResIII
ATPase
nSTAND3
AAA_30
AAA_16
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
141286924
NCBI-ProteinID:
XP_073675155
LinkDB
All DBs
Position
15:40248921..40279792
Genome browser
AA seq
1144 aa
AA seq
DB search
MGRLRKRHNWKGRQQSTSVETPAADRQTDVQVEIQDGARLKGVDACNALVLPSTKTKKQK
VEHPVPKKKALTKKQRKNLERVLEQKEKKAHRAEVLSKLAEVQLPESELKLLYTTAKLGT
GDKLFQNKESVIEDQDGGSSTVRISSLSGANRKRRREVNADEEEEKEESEKSSEEDESSE
EEEEKTPEEKPTEEPQMLKEEATQKETDVKEEKKDEDVKEKTHKEEDCKPAVFIPVDRLP
EIQEARLKLPILAEEQVIMEAVRENESVVLCGETGSGKTTQVPQFLYEAGYASSGGIIGV
TEPRRVAAISMSRRVATEMNLPSGVVSYQIRYEGNVTENTKIKFMTDGVLLKEIQKDFLL
QKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRLF
RIPPPVIKVEARQFAVTVHFNKRTAMDDYTGEAFRKICKIHRMLPPGGILVFLTGQAEVH
SLCRRLRKAFPYRPHREHTDSMETEDDLKQSKRAKKKKNVSLPRINLDNYSALPVDEGDE
DRQAGIDEDDFEGSDLELELGDHPDTDHEEKADPSIPLYVLPLYSLLAPELQAKVFRPPP
AGARLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKVNWISQASANQRAG
RAGRTEPGHCYRLYSSAVFGDFSLFSEAEITRRPVDDLVLQMKDLNIEKVVNFPFPTPPS
SEALIAAEQLLISLGALEEPPRRGRLDEIERARLACPITPLGRAMAAFPVAPRYAKMLAL
GRQQGCMPYIITIVAAMTVREIFEDYDRPAGSEEESTKMAGKKARCIQMRRLWAGQGQSL
QLGDLMVLLGAVGACEFAGCTHQFCEENGLRYKAMLEIRRLRGQLTNAVNAVCSDAGVYV
DNKMAPPTESQVLCLRQIVLAGLGDHIARRVQAEELLDPKWRNGYKTPLLDDPVFIHPSS
ALHKTLPEFVVYQEIVETTKMYMRGVCAVQAEWIPKLLPQYCHFSAPEESPAPWYCPLSG
RVKCLQQSTFYRVSWKLPAIEMDYPEGLERYKLFAKFFLEGQVCPKIQQFTKCLLSSPST
MLKTWAKLQPRTEILLTALVAEKADSRTSLEAAWKKDEKYLLSAFCQWIPESLHAEVSKS
WPPL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgggcagattaagaaagagacacaactggaaaggcagacagcagagcacatctgtggaa
acccctgctgcagacagacagactgatgtgcaggtggagatacaagatggagccagactt
aaaggcgtagacgcctgcaatgctcttgttctgccctccaccaaaaccaagaagcaaaaa
gtagaacatcctgtacccaagaaaaaagccctgacaaagaaacagaggaagaacctggag
agagttctggagcagaaagagaaaaaagcccatagagcagaagtattatctaaactagct
gaggttcagctgcccgagtcagagctcaaactgctttacacgaccgctaaactcggcact
ggagacaaactcttccagaacaaagaatctgtgatagaagatcaggatggcggttcatct
actgtcaggatcagcagtttgagcggagcaaacagaaagagacgaagagaggttaatgct
gatgaggaggaggagaaagaggaatctgagaagtcatcagaggaagatgagtcatctgag
gaagaggaggaaaaaacacctgaggaaaaacccacagaggagccacagatgctgaaagag
gaggcgacacagaaagagacggatgttaaagaagagaagaaagatgaagatgtgaaagag
aaaacgcataaggaggaagactgtaaacctgctgtgtttattcctgtggaccgactgccg
gagatacaggaggctcgtctgaagttgccgatcctggcagaggaacaggtgatcatggaa
gcggtgagggaaaacgagagtgtggtgttgtgtggagaaacaggcagtgggaaaaccaca
caggtgcctcagttcctgtatgaggcaggatacgcaagctctggtggcattattggtgtg
acggagcccaggagagtggcagcgatcagcatgtctcgccgtgttgccacagaaatgaac
ttacccagcggggtggtgtcttatcagatcaggtacgaggggaatgtgacagaaaacaca
aagattaagtttatgacagatggtgtcctgctgaaagaaattcagaaggatttcctgctg
cagaaatacagtgtgatcatcattgatgaagctcatgagcgcagcgtttacactgatatc
ctgatcggcctcctgtcccgcattgtgcctctccgcaacaagaaaggcttacccatgaag
ctgatcatcatgtcagccacgctgcgagtggaagacttcaccgaaaacaagagactcttc
cgaattcctccaccagtcatcaaggtggaggcccgccagtttgcggtcacggttcatttt
aataaacgcacagcaatggatgactacactggagaagctttcagaaagatctgcaagatt
caccgtatgctgccgccaggtgggattctggtgtttctgacgggccaagcggaggttcat
tctctgtgtcgcagactgagaaaggctttcccttacagaccccaccgagagcacacagat
tcaatggaaacagaagatgatctgaagcagtcgaaaagagcaaagaaaaagaagaatgtg
tctctcccgaggattaatctggacaattactcggctctgcctgtagacgagggtgatgag
gatcgtcaggctggcattgatgaagatgattttgagggttcagacctggagctagaactg
ggagatcatccagacactgatcacgaggagaaggctgatccgtccatcccgctgtacgtg
cttcctctctactctctgttggcacctgagctgcaagcaaaggttttccgtccacctccc
gctggagcacgtctgtgtgtcgttgcaactaacgtggccgagacgtctctaacgatcccc
ggcatcaagtatgtcgtagactgcggtcgtgtgaagaagaggttttatgacagagtgacg
ggcgtctcctcctttaaggtcaactggatctcacaggcttcagccaatcagagggcagga
agggcgggcagaaccgagccaggccactgctataggctctattcgtccgctgtgtttgga
gatttcagtttgttttcggaggctgaaatcacacggcgtcctgtcgatgaccttgttctt
cagatgaaagatctcaacattgaaaaggttgtgaatttcccatttccgactcctccctca
tccgaggcactgatcgctgccgaacagcttctgatctctctgggagcgctggaggaacca
ccacgacgcggacgtttggatgagattgagagggcacgtctggcctgtcccataacccct
ctgggccgcgcaatggccgcgtttcctgtagcaccacgctatgcaaagatgctagcgctg
ggccgtcagcagggctgtatgccgtatatcatcaccatagtggccgccatgaccgtcaga
gagatctttgaggattatgacaggcccgcaggcagcgaggaggagagcactaagatggca
ggaaaaaaagcaagatgtattcagatgaggaggttatgggctggtcaaggacagtcgctt
cagctgggagatctaatggttctactgggtgcggttggtgcttgtgaatttgcgggctgc
actcatcagttctgtgaggaaaacggtcttcggtacaaagcaatgctggaaatccgaaga
ctacgaggacagctgaccaatgctgtaaatgccgtgtgctctgacgctggcgtatatgtg
gataacaagatggctcctccgacggagtctcaggtgctgtgtttacggcagatcgtgttg
gctggtttaggagatcacatcgccagacgagtgcaggctgaggagctgctcgaccccaaa
tggaggaacggctacaagactcctctgctggatgatccagtgttcattcacccatcgtct
gctcttcataagacacttccagagtttgtcgtttatcaggaaatcgtggaaaccaccaag
atgtacatgagaggcgtttgtgccgttcaggctgaatggattccgaagctcctcccacag
tattgtcactttagtgctccggaggaaagccccgccccctggtactgcccactgagcggc
cgggtcaagtgtcttcagcagagcaccttctacagagtcagttggaaacttcctgccatt
gagatggattacccagagggccttgagcgttacaaactgtttgcaaagtttttcctggag
ggccaggtttgtcccaagattcaacagttcaccaaatgtttactgtcgtcgccctccacc
atgttgaagacgtgggccaagctgcagccacggactgaaattcttctgactgcgctggtg
gcagagaaagcagacagcagaacgtctttagaagctgcgtggaagaaagatgaaaaatat
ctgctgtcagcattttgccagtggatcccagagtctcttcatgcagaggtcagtaaaagc
tggccaccactctga
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