Garra rufa (doctor fish): 141287107
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Entry
141287107 CDS
T11039
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141287107 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141287107 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
141287107 (pdlim2)
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Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
141287107
NCBI-ProteinID:
XP_073675340
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Position
15:complement(243718..338742)
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AA seq
365 aa
AA seq
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MMPFTVNLIGPSPWGFRISGGRDFKKAITVSKVNTGSKAETASLQPGDIILEINGLNTGE
MLNVEAQNKIKSSTTQLQLLVERPAPPTPGQTNGIKEQLVGRFQEAVQVSRDENQNYREY
TISSPASLSPGPYSPEPPPSPDRKAGRITPTNKSLPLHSWSSEEKNIQSHRLSRPLSQEI
SPVDFRSNSVSSRTPTPPGRYSPHSPIDREVPTSPRRSSDFAMQRFDRDSEVYKMIQENK
ESRAAPRQSNTFKMLQEVLEADEKEAAIRFPSKLSPSPSKTTSSVGGVQKHHTCEKCGTS
IVTQAVRIGEDRFRHPECYTCTECGLNLKMRGHFWAGDKMYCEKHARERYQGPGSNHRYV
VSPNH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgtttacagtgaacctgattggcccgtccccatggggattcagaatttctgga
gggcgagactttaagaaggccataacagtttccaaggtgaacactggcagtaaagcagag
acggcctctcttcaacctggtgacatcatcttggagattaatggacttaatactggcgag
atgctcaacgtagaggcacaaaacaaaatcaagagctctacaacacagctgcaacttctc
gtagaaagacccgctcctcccactcctggtcagaccaatggaattaaagagcaactggtt
ggccgcttccaggaggctgtgcaggtgagtcgagatgagaaccagaactacagagagtac
accatctccagcccagcctctctgtcacctggcccgtattcacctgagccaccacccagc
cctgaccgcaaagcgggcagaatcacacccaccaataagagtctcccgcttcattcctgg
tcttcagaggagaagaacatacagagtcacagactgtcccgacccctctctcaggagatc
tctcctgtggatttccgcagtaattccgtgtccagtcggactccaactccacctggacgg
tactctccacacagccccatcgaccgagaagtgcccacttcccctcgacgcagttcggac
tttgccatgcagaggtttgacagagactcagaggtgtacaagatgattcaggagaacaaa
gaatcccgcgcggctcctcgccaatccaacaccttcaagatgctgcaagaggtgctggag
gctgatgagaaagaggccgccatccggtttccaagcaagctgtcgccaagcccctccaag
accacgtcttctgttggcggtgtgcagaaacaccacacctgtgaaaaatgcggcaccagt
attgtcactcaggccgtgaggatcggagaggatcgcttccgtcacccagaatgctacacc
tgtacagaatgcggcctcaacctaaagatgcgtggccacttctgggcgggggacaaaatg
tactgcgagaaacacgccagagaaagataccagggtcccggcagtaaccatcgctacgtt
gtgtccccaaaccactga
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