KEGG   Garra rufa (doctor fish): 141287107
Entry
141287107         CDS       T11039                                 
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:grf00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    141287107 (pdlim2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:grf04990]
    141287107 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:grf04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   141287107 (pdlim2)
SSDB
Motif
Pfam: PDZ DUF4749 PDZ_6 LIM PDZ_2 DmmA-like_C
Other DBs
NCBI-GeneID: 141287107
NCBI-ProteinID: XP_073675340
LinkDB
Position
15:complement(243718..338742)
AA seq 365 aa
MMPFTVNLIGPSPWGFRISGGRDFKKAITVSKVNTGSKAETASLQPGDIILEINGLNTGE
MLNVEAQNKIKSSTTQLQLLVERPAPPTPGQTNGIKEQLVGRFQEAVQVSRDENQNYREY
TISSPASLSPGPYSPEPPPSPDRKAGRITPTNKSLPLHSWSSEEKNIQSHRLSRPLSQEI
SPVDFRSNSVSSRTPTPPGRYSPHSPIDREVPTSPRRSSDFAMQRFDRDSEVYKMIQENK
ESRAAPRQSNTFKMLQEVLEADEKEAAIRFPSKLSPSPSKTTSSVGGVQKHHTCEKCGTS
IVTQAVRIGEDRFRHPECYTCTECGLNLKMRGHFWAGDKMYCEKHARERYQGPGSNHRYV
VSPNH
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgatgccgtttacagtgaacctgattggcccgtccccatggggattcagaatttctgga
gggcgagactttaagaaggccataacagtttccaaggtgaacactggcagtaaagcagag
acggcctctcttcaacctggtgacatcatcttggagattaatggacttaatactggcgag
atgctcaacgtagaggcacaaaacaaaatcaagagctctacaacacagctgcaacttctc
gtagaaagacccgctcctcccactcctggtcagaccaatggaattaaagagcaactggtt
ggccgcttccaggaggctgtgcaggtgagtcgagatgagaaccagaactacagagagtac
accatctccagcccagcctctctgtcacctggcccgtattcacctgagccaccacccagc
cctgaccgcaaagcgggcagaatcacacccaccaataagagtctcccgcttcattcctgg
tcttcagaggagaagaacatacagagtcacagactgtcccgacccctctctcaggagatc
tctcctgtggatttccgcagtaattccgtgtccagtcggactccaactccacctggacgg
tactctccacacagccccatcgaccgagaagtgcccacttcccctcgacgcagttcggac
tttgccatgcagaggtttgacagagactcagaggtgtacaagatgattcaggagaacaaa
gaatcccgcgcggctcctcgccaatccaacaccttcaagatgctgcaagaggtgctggag
gctgatgagaaagaggccgccatccggtttccaagcaagctgtcgccaagcccctccaag
accacgtcttctgttggcggtgtgcagaaacaccacacctgtgaaaaatgcggcaccagt
attgtcactcaggccgtgaggatcggagaggatcgcttccgtcacccagaatgctacacc
tgtacagaatgcggcctcaacctaaagatgcgtggccacttctgggcgggggacaaaatg
tactgcgagaaacacgccagagaaagataccagggtcccggcagtaaccatcgctacgtt
gtgtccccaaaccactga

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