Garra rufa (doctor fish): 141287182
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Entry
141287182 CDS
T11039
Symbol
ppih
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase H
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141287182 (ppih)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141287182 (ppih)
03110 Chaperones and folding catalysts [BR:
grf03110
]
141287182 (ppih)
Enzymes [BR:
grf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
141287182 (ppih)
Spliceosome [BR:
grf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141287182 (ppih)
Chaperones and folding catalysts [BR:
grf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
141287182 (ppih)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
141287182
NCBI-ProteinID:
XP_073675418
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Position
15:complement(7655221..7701088)
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AA seq
177 aa
AA seq
DB search
MNVQPSNPNNPIVFFDVSIGGQEVGRMKVELFADIVPKTAENFRQFCTGEFKKDGVPVGY
KGCTFHRVIKDFMIQGGDFVNGDGTGICSIYRGPFADENFRMKHSGPGLLSMANSGPGTN
GCQFFITCTKCDWLDGKHVVFGKVVDGLLVMRKIENVPTGPNNKPKLPILIAQCGEM
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcaaccttcaaaccccaataacccgatagtgtttttcgacgtctccattgga
ggacaagaagtgggcagaatgaaggtagagctttttgctgacattgttccaaagactgcg
gaaaattttcggcagttctgtactggtgaattcaagaaggacggtgttcctgtaggctat
aaaggctgcacatttcatcgggtgataaaggacttcatgattcagggtggtgattttgtc
aatggtgatggcactggtatctgcagtatctacaggggtccgtttgcagatgagaacttc
agaatgaaacactctggcccaggactcttgtcaatggcaaacagtggaccaggaacaaat
ggctgtcagttttttattacctgcacaaagtgtgactggttggacgggaagcatgtggta
tttggaaaagtggtggatgggttgcttgtcatgagaaaaattgagaatgtaccaacagga
cccaacaacaagcccaagctgcctattctcattgcccagtgtggagaaatgtga
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