Garra rufa (doctor fish): 141287217
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Entry
141287217 CDS
T11039
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141287217 (apex2)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
141287217 (apex2)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
141287217 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
141287217
NCBI-ProteinID:
XP_073675452
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Position
15:26475118..26481716
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AA seq
563 aa
AA seq
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MKIVTWNINGIRTFKNGIKKTLDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRSGYSGVATYCKDTATPFLAEEGLTGLLANQGEAVGCYGDQVELSSEELLALDNEGRAV
ITQHQFIGKDGPQKLTVINVYCPRADPEKPERKLYKLQFYQLLQCRAEAILSSGSQVIVL
GDVNTSHRPIDHCDPNDVDNFEDNPGRKWLDHFLFGKAEKAQNGNTEDELQEIFPKSPSG
GKFVDSFRRFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFADCCLVESAFIGVDIMPEVE
GSDHCPVYAQLSCTLQSSPKCPPLCTRHMPEFTGRQQKLSRFFVKVSEKERSSKDSEESL
PGSQDAGEIRENLNPVVQGNSVAKKRPTCREKDTNTNKAKRSKQTKTESNAKGSLLAFFK
PKQTPSIPSSENLSPKQTESSQDSPGSESDTRSCPADVQSETSLSVVTEMETENQDEVEG
ESTSIDKSKDCKKGPCTGFWKAVLHGPPQPPLCKSHNEPCVLRTVKKAGPNLGRQFFVCA
RPQGHASNPQARCNFFAWVDKGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaacatggaacataaacggcatacgaacgtttaaaaacggcatcaagaaa
actctggattcattcgatgccgatataatctgcgttcaagagactaaagtgacccgtgac
ctgttggacgagaagacagcaattgtcgatggctacaattcatactttagttttagccga
ggacgaagtggatactcgggcgtcgccacctactgtaaggataccgctactccattcctg
gcagaggaaggattaacaggtctgctggccaatcagggagaggctgttggttgctatggt
gaccaggttgagttgtccagtgaggagcttctggcactagacaatgaaggaagggctgtc
atcactcagcatcaattcattggcaaagatggaccacagaagctgaccgttatcaatgtt
tattgtccccgagctgacccagagaaaccagagagaaaactgtacaagctccagttttac
cagctcctgcaatgcagagctgaagctatcttgagctcaggaagtcaggtgattgtattg
ggagatgtgaacacttctcatcgacccatagaccactgtgacccaaatgatgtggataac
tttgaagataatcctgggaggaagtggctggatcatttcctttttggaaaagcagaaaag
gctcaaaatggaaatactgaagatgaacttcaagaaatcttcccaaaatctccctctggt
ggcaagtttgttgactccttccgccgttttcacccaaagcgctccaacgccttcacatgc
tggtccacactaacaggtgccaggcagaccaactatggcacacgtatcgactacatcttt
gccgactgctgtctggtggaatcggcctttattggcgtggacattatgccggaggtggag
ggatccgatcattgtcccgtatatgcacagctcagctgtaccctccagtcaagtcctaag
tgtccacccttatgcacacgtcacatgccggagttcactggcagacagcagaaactttca
cgcttctttgtcaaagtttcagagaaagagaggtcttctaaagactctgaagagagtctg
cctggatcacaggatgctggggaaattcgggaaaacctgaatcctgtagtgcaggggaac
agtgttgcaaagaagagacctacatgtagagaaaaagacacaaatacaaacaaagccaaa
agaagcaagcagacgaaaaccgaaagcaatgctaaaggaagtcttttagctttctttaag
cctaaacaaacaccatcgatcccctctagtgaaaacctgagcccgaagcagacagaatcc
tctcaggatagtccaggaagtgagagcgacacaagaagctgccctgccgatgtgcaatcg
gagaccagtctttctgtggtaaccgagatggagactgaaaatcaggatgaagtggaagga
gaatcgacatccatagacaagtcaaaggactgtaagaaggggccatgcactggtttttgg
aaagcagttttgcatgggcctcctcaaccaccattatgtaaatcacacaatgagccttgt
gtcttacgcactgtgaaaaaagcaggccctaatttaggccggcagttttttgtatgtgcc
cgtcctcaaggccatgcctccaatcctcaagccaggtgtaatttttttgcctgggtagat
aaaggaaagtag
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