KEGG   Garra rufa (doctor fish): 141287230
Entry
141287230         CDS       T11039                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141287230 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:grf03041]
    141287230 (sf3a1)
Spliceosome [BR:grf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    141287230 (sf3a1)
 Complex B
    141287230 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    141287230 (sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 141287230
NCBI-ProteinID: XP_073675464
LinkDB
Position
15:10038347..10048293
AA seq 781 aa
MPPGPVQIMQPELNNKPEDQKDETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPSDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQQVASQQLPQ
KVQAQVIHETVVPKEPPTEFEFLADPPSIAAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLLKLKKEAENPREVLDQVRYRVEWA
KFQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILI
QERYEKFGESEEVEMEVESEDEEDEREGRADGHAAQLDQDTQLQDMDEGSDEEDDGMKAP
LPPDNPLPPPLPPTPDQVIIRKDYDPKASKPLPPVSVPDEYLISPITGEKIPASKMQEHM
RIGLLDPRWLEQRDRSIRERQIEEEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDDSKEKIGPSK
PNETLQPPMPSVAPSMPKPTPPISTPPMAPPVRTTLLPAVPVIPRPPVAPVVRLGPGQVL
APMPPMLHAQRINVVPMPPSGPHIMAPRPPPMVVPAAFVPAPPVPQPPSAVAAPMPPAHP
PPPHEDEPSSKKMKTEDNLIPEDEFLRRNKGPVAVKVQVPNMQDKTEWKLSGQVLNFNLP
LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGSVIHLALKERGGRK
K
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtgcagatcatgcagccggagctaaataacaagcccgaagaccag
aaggatgagactccagccacaaagcccattgtgggaatcatctacccgcctcccgaagtc
cgaaatattgttgacaagactgccagcttcgtggccaggaatggacctgagttcgaggcc
agaattcgacagaatgaaatcaacaatccaaaattcaacttcctcaaccccagcgaccct
taccatgcctactaccgccacaaggtcaatgagttcaaggagggcaaagctcaggaacca
tctgcagctgtgcctaaagtcatgcaacagcaacaagtggcatcacagcagcttcctcag
aaggttcaagcacaggttatccatgagacggtggtgcccaaggagcctccaactgagttt
gagttccttgccgaccctccctccattgcagcttttgacctggatgtggtgaagctgacc
gcacagtttgtcgcccgaaatggccgccagtttctcacacaattgatgcagaaggagcag
aggaactaccagtttgactttctacgaccacagcacagcttgtttaactattttacaaaa
ctggtggagcaatacacaaaggttttaatccctccaaaaggtcttctgctgaaactgaag
aaggaagcagagaatcctcgtgaggtcttggaccaggtgaggtatcgtgtggagtgggcc
aagttccaggaaagagagaggaagaaggaagaggaggagcgagaaaaggagagggtggct
tatgctcagattgactggcatgactttgtggtggtggagactgtagacttccaaccaaat
gagcaaggtaatttccctcctcccacaactcctgaggagctgggtgctcgtatcctgatc
caggagcgctatgagaagtttggagagagtgaggaggtggagatggaggtagagagtgaa
gatgaagaggatgagagagagggcagagcagacggacatgcagctcagctggaccaggac
acacagctacaggacatggacgagggctctgatgaagaggatgatggcatgaaggctcct
ctaccccctgataaccctctgccaccacctttgccccccaccccggaccaggttatcatc
cgcaaagactacgaccccaaggcctctaagcctctgcctcctgtgtccgtccctgatgag
tacctcatctctcccatcactggtgagaagatcccagccagtaagatgcaggagcacatg
cgcatcggtctgctggacccccgctggctggagcagcgtgaccgcagcattcgtgagcgc
cagatcgaggaggaagtgtacgctcctggccttgatatcgagagcagcctgaagcagctg
gccgagagacgtaccgatatcttcggtgtggaagaaacggccatcggtaagaagatcgga
gaggaggagatacagaaaccagaggagaaggtcacatgggacggtcactctggcagtatg
gctcgtacccagcaggcggctcaggctaacatcaccctgcaggaacagattgaagccatc
cacaaagctaaaggcctggttcaggaggatgacagcaaggagaagatcggtcccagcaag
cccaatgaaactcttcagccgcctatgccatcagtggcccccagcatgcccaaacccacc
ccaccaatcagcacacctcctatggcacctccagtgcggaccacgttgctccctgcggtt
cctgtcatacccagacctccagtagctcctgtggtgcgcctgggccctggacaagttctg
gccccaatgccacccatgctgcatgcccaacgcatcaatgtggtgcccatgccaccctct
ggaccccatattatggcacccagacctccacccatggtggttcctgctgcatttgtacct
gctccccctgtgcctcaacctcccagcgctgttgccgcccctatgcctcctgcccatcct
ccacctcctcacgaggatgaaccttccagcaagaaaatgaagactgaggacaacctgatt
ccagaagatgagttcctgcgcaggaacaagggacctgttgcagtcaaggtccaggtgccc
aacatgcaggacaagacagaatggaagctgagtggccaagtgctcaacttcaacctgcct
ctcacagatcaggtgtctgtcatcaaggttaagatccatgaagctactggtatgccagct
ggaaaacagaagctgcagtatgagggtattttcatcaaagattccaactctctggcctat
tacaacatgaacaatggctccgtcatccatctggcccttaaagaaagaggaggaaggaag
aagtag

DBGET integrated database retrieval system