Garra rufa (doctor fish): 141287288
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Entry
141287288 CDS
T11039
Symbol
ppardb
Name
(RefSeq) peroxisome proliferator-activated receptor delta b
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
grf Garra rufa (doctor fish)
Pathway
grf03320
PPAR signaling pathway
grf04148
Efferocytosis
grf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141287288 (ppardb)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141287288 (ppardb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
141287288 (ppardb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141287288 (ppardb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
grf03310
]
141287288 (ppardb)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
141287288 (ppardb)
Nuclear receptors [BR:
grf03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
141287288 (ppardb)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
141287288
NCBI-ProteinID:
XP_073675521
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Position
15:complement(25495991..25517816)
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AA seq
528 aa
AA seq
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MEQVEQPTSEMKCDSPVDVAAAQEPLVFTGVTEDQSSPRTDLNPVQILEDTTWMAVQEGE
SASSDCGGMSDLQEPSSASGEEVEGSETSDAMGLEVSPSNKASWGATLQNGDGPPQESPQ
ENSDTPVTAQMFPDPLQNPSLSLSDQLRLGRDDPNNMGLNVECRICGDKASGFHYGVHAC
EGCKGFFRRTIRMKLEYERCERACKVQKKSRNKCQYCRFQKCLALGMSHDAIRYGRMPEA
EKKKLVAGLLAGEKLQGSSGADLKTLAKHVNTAYLRNLNMTKKKARSILTGKTSCTSPFV
IHDMDSLWQAENGLVWNQLNGAPPNKEIGVHVFYRCQCTTVETVRELTEFAKNIPGFVDL
FLNDQVTLLKYGVHESIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRKPFSEIMEPKFE
FAVKFNALELDDSDLALFVAAIILCGDRPGLMNVKQVEQIQDGILQALDQHLQAHHPDSP
HLFPKLLQKMADLRQLVTENAQLVQMIKKTESETSLHPLLQEIYKDMY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggttgagcaacctacctcagaaatgaaatgtgacagccctgtagacgtcgca
gcagctcaagagcccctcgtgttcacaggagttacggaggaccagtcgtctccacggaca
gacttgaaccctgtccagattcttgaagacacaacttggatggcagtccaggagggtgag
tctgcgtcctcggactgtggagggatgtcggacctacaggagccgagttcagcgtcgggt
gaggaggtggagggcagcgagacgtctgatgctatgggattagaggtctcacccagcaac
aaggcatcttggggggccactctacagaatggagatggaccaccgcaggagagtcctcaa
gagaatagtgacactcctgtaacagctcaaatgtttccagatccgttacagaacccctct
ctctcgctgtcagaccagttacgactgggtcgggatgaccccaataatatgggcctgaat
gtcgagtgccgcatatgtggagataaagcctcaggatttcattatggagttcatgcttgt
gaaggatgcaaggggtttttcagacgcaccattcgtatgaagctggagtatgagcggtgt
gagcgtgcctgtaaagtccagaaaaagagccggaacaaatgccagtactgtcgcttccag
aagtgcctggcattgggcatgtcacatgatgcgatcaggtacggacgtatgccagaggcg
gagaaaaagaagctagtggcagggctcctcgctggggagaagctgcaaggctctagtggt
gctgacctcaaaacactggccaagcatgtcaacacagcctacctgaggaacctcaacatg
accaagaaaaaagcacggagcatcctcacgggcaagacgagctgcacatcaccttttgtg
atccacgatatggactcgctctggcaggcagaaaacgggctggtctggaatcagcttaat
ggagcaccacccaacaaagaaatcggggtccacgtcttctaccgctgccagtgcaccaca
gttgaaactgtacgagagctcacagagtttgccaaaaacatccctggttttgtagatctc
ttccttaatgatcaggtaacgctgttaaaatatggagtccatgaatccatatttgcgatg
ctcccatcgctcatgaataaggatgggctgctggtagccaatgggaaaggctttgtgaca
agagagttcctgcgtagcctacgcaaacctttcagcgagatcatggagcccaaatttgag
tttgcggtgaaattcaatgccctagagctggatgacagcgacctggctctgtttgtagca
gccatcattctgtgcggagatcgtcctgggctgatgaacgtgaagcaggttgaacagatc
caggatggcatcctgcaagctctggaccaacatcttcaggcgcaccacccggactctcct
catctcttccccaaactcctccaaaagatggctgacctcagacagctggtcacagagaac
gcccagctggttcagatgatcaaaaagactgaatctgagacctccctccacccgctttta
caggagatctataaagacatgtactga
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