Garra rufa (doctor fish): 141287408
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Entry
141287408 CDS
T11039
Symbol
rbm15
Name
(RefSeq) RNA-binding protein 15
KO
K13190
RNA-binding protein 15
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141287408 (rbm15)
03041 Spliceosome [BR:
grf03041
]
141287408 (rbm15)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
141287408 (rbm15)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141287408 (rbm15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
Nup35_RRM_2
RRM_3
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
141287408
NCBI-ProteinID:
XP_073675659
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All DBs
Position
15:25037851..25045140
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AA seq
854 aa
AA seq
DB search
MKGKERSPVKKRSRALDDIRDRGGSHPTSKKMGVISISGGGSNNGNSSSKSEGSSARRGL
IGDKRDGRDFDGHVSSRTGNNHGYTSPVASSSGKNHASSLSLEAAARTNSRGESRAPLPT
NESEYKTLKISELGSQLSDEEIEDGLFHEFKKFGDVSVKISRVNDERIAFVNFRRPDDAR
AAKHARGRLVLYDRPLKIEAVYLNRRRSRSPVDKDHFSVVAGHRHLHTQRPLSPTGLGYR
DYRLQQLALGRLPPPPPPPLPRELEREREFAFYEARARPAYIAERAAPFREEDFISPEDD
QRANRTLFLGNLDITVTENDLRRAFERFGTITEVDIKRPTRGQSSTYGFLKFENLDMAHR
AKISMSGKVVGRNPIKIGYGKATPTTRLWVGGLGPWVPLTALAREFDRFGTIRTIDYRKG
DTWAYIQYESLDAAQAACTHMRGFPLGGPDRRLRVDFADTEHRYQQQFLQPLPLQHYEIV
AESFVHRATPEAIRVRERTPPPLHFRERELYAGAEWPAPAIRERVRTPAFEPLEHLERER
RREAWSLERELPGRDAARKRRLMEDGRHLECSPDSSSEWAARRRRPPSLEGSPGGSSRDG
RFSDSERPARADRVSPARESRSSLDRGPAEKRIKSNSSLSETSISASPAERKRKAGDSAK
GASKRDRSESSSKNSQASKQDAGGKLSMAWNGMLLLKNSNFPASMHLLEGDLSVASSLLI
DGGTGGKVTQLRITQRLRLDQPKIDEVSRRIKVAGPGGYAVLLAVPGSSEEASSSDPAAS
TQRPLRNLVSYLKQKQAAGVISLPVGGSRDKDNTGVLHAFPPCDFSQQFLDSSAKALAKT
EEDFLVMIIVRGAS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggaaagagcggtcgccggtgaaaaagcgttcaagggccttggatgatatacga
gacaggggaggaagccacccgaccagtaagaaaatgggggttatctcgatttctggcggt
ggaagcaacaacggcaatagttcgtctaaaagcgaaggcagttctgcacgacggggactg
atcggagataaaagagacggacgggattttgacggacatgtctccagtcggactggaaat
aaccacggttacactagccctgttgcgagctccagcggcaagaatcacgcctcgagcctg
tccttagaggcggccgcgcgcaccaactcccgaggagagtcgcgcgccccacttcccacg
aacgaaagtgagtacaaaactttaaaaatcagcgagctcggctcgcagctgagcgacgag
gaaatcgaggacggcctctttcacgaattcaaaaaatttggtgacgtgagtgttaaaatc
agccgagtcaacgacgagagaatcgcattcgtcaactttcggagaccggatgatgcccga
gcggcaaagcacgcccgaggccggctggtgctctacgaccgtcctttgaaaattgaggcg
gtctacttgaataggaggagaagtcgatctcctgtagacaaggaccatttctctgtcgtt
gcaggccatagacatttgcatacccagaggccgctttcgccaaccggtctgggttacaga
gactaccggttacagcagctagcgctgggtcggcttcctcctcccccacccccgccttta
ccgagagagcttgaaagagaaagagaattcgccttttatgaagccagggcgcggcccgca
tacatcgcggagcgggcggcccctttccgcgaggaggactttatctctccagaggacgac
cagagagccaaccgcacactatttctgggtaatttggatattactgtgactgagaatgac
ttgaggagagcgtttgaacgttttgggaccatcacagaggtggacattaaaagacccacc
cggggacagagcagcacctatggctttcttaaatttgaaaacttggacatggcccataga
gctaaaattagcatgtctgggaaagttgtgggccgaaaccccataaaaattggctatggc
aaagccacccccaccacacgcctctgggtgggcggtcttggaccttgggtgcctctgact
gctttagcaagggaatttgaccgcttcggcaccatcaggactatagactacagaaaaggg
gacacctgggcttatattcagtatgaaagcctggatgccgctcaagcagcctgcacacac
atgcgtggatttcctctcggcggtcccgacaggaggctgagggtggactttgctgacacg
gagcaccgctaccagcagcagttcttgcagcccctccctttgcaacactatgaaatcgtg
gctgagtctttcgtccatcgcgccacacccgaggccatcagggtccgagaacggactccc
ccaccactgcacttcagagaaagagaactgtacgctggggccgaatggcccgcgcctgcc
attcgtgaacgtgtacgaactcctgcatttgagcccctcgaacacttagagcgtgagcga
cggcgagaggcgtggtcgctggagagggagctcccgggcagggatgctgcacgcaaacga
cggctcatggaggatgggagacatcttgagtgttcgcctgacagcagcagtgagtgggcg
gcccgccgtcgcagaccgccctcccttgaaggcagcccaggagggagcagtcgagatgga
cgcttcagcgactctgagcggccggcgagagccgaccgggtgtccccggcacgagagagc
cgcagcagcctggaccgaggccctgctgaaaaacgcatcaaaagcaacagcagcctctca
gagaccagcatcagcgcgagccctgcggagagaaagcgcaaagcgggtgattcagctaaa
ggtgcctcaaagagggaccgatctgagagcagctccaaaaacagtcaggcttcaaagcag
gatgcagggggcaagctgagcatggcctggaatggcatgctgcttctcaaaaacagtaac
ttcccagccagcatgcacctcctggagggggacctgagtgtcgccagcagtctcctcatc
gacggcggcacgggcggtaaagtcacacaactacgcatcacacaacgccttcgcctcgac
cagcccaagatcgacgaagtgtctcgacgcatcaaagtcgcaggcccaggcgggtatgcg
gttctactggcggttccgggcagctcagaggaggcttcgtcttcggacccagcagcatcg
acgcagaggcccctgcgcaacttggtttcgtacctgaagcaaaagcaggccgccggggtc
atcagtttgcccgtcgggggcagtagagataaggacaacactggggtcctgcacgcattt
ccaccatgtgatttctctcagcagttcttagattcttctgcgaaagctcttgccaaaacg
gaagaggacttcctggtcatgatcattgtgcgaggagcatcttaa
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