Garra rufa (doctor fish): 141287474
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Entry
141287474 CDS
T11039
Name
(RefSeq) hyaluronidase-1
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00531
Glycosaminoglycan degradation
grf01100
Metabolic pathways
grf04142
Lysosome biogenesis
Module
grf_M00076
Dermatan sulfate degradation
grf_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
141287474
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
141287474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
grf02042
]
141287474
00536 Glycosaminoglycan binding proteins [BR:
grf00536
]
141287474
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
grf00537
]
141287474
Enzymes [BR:
grf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
141287474
Bacterial toxins [BR:
grf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
141287474
Glycosaminoglycan binding proteins [BR:
grf00536
]
Heparan sulfate / Heparin
Enzymes
141287474
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
grf00537
]
Enzymes
141287474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
PROSCOOP16
Motif
Other DBs
NCBI-GeneID:
141287474
NCBI-ProteinID:
XP_073675726
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All DBs
Position
15:23983154..23989189
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AA seq
497 aa
AA seq
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MAVRKHTFIFLSLSLLFLFLCLFTHPCVCGPARAPLLAGQPFLVLWGVPDKDCLGRPDPA
AYGMEWEGRVAIFYEDTLGLYPYFTVQDRPVNGGLPQHTSLDLHLQRLEGDLTASLPQAG
APGLGVLRWQEWAPQWNRNRGVKTKYLVESRALLRGFFPDWSAEEVEKWSQVDFEAAAQS
IMMETLREVKRLRPQRLWGMAPYPNCYNFDSTQIALANYTGRCPAAEMALNDELMWLWKR
SGALYPALSLEKLPEGTKGAWLYATNQIREALRVAALAGTTSDLPVFPLIKIVYSSSNSF
LSEIDLVNTIGESAAMGASGVIIWEKSLAVKTQKSCSEFGSYVRQVLGPYAVNVTTAARL
CGVSLCQGRGRCVRKNPEDPTYLHLPSAHFMLLPNGAEGVRATGELPTAYIDLWRKDFRC
QWFEALEGAAADQESGVVLENRRKITSPTVKTMFGISQSQGTVVPVTVVPTKQPVDGGNS
ALYTPFILLPSLVLHYI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaagaaaacacacattcatcttcctctccctttctcttctattcctcttcctc
tgtctcttcactcatccatgtgtctgcggtcctgcccgggcccctcttctcgccggccag
ccattcctagtgctatggggggttccagataaagactgtttgggtcggccagacccagct
gcatatgggatggagtgggaaggccgtgtggcaatattttatgaggacacgctaggactt
tacccatatttcactgtacaggatcgtcctgtcaatggtggcctaccacaacacaccagc
cttgatcttcacctccagaggctggagggcgacctcacggcctcattacctcaagcagga
gcgcctggtttaggggtgctccgctggcaggagtgggcgcctcagtggaacaggaacagg
ggagttaaaacaaagtaccttgtggagtcgagagcactcctccggggattttttcctgac
tggagcgcagaggaagtggagaaatggtctcaggttgattttgaagcagcagcacagtct
ataatgatggaaaccctgcgggaggtgaaaagactccgcccacagagattatggggcatg
gccccgtatcctaactgctataactttgactccacccagatagcgttagccaattacacg
ggacggtgccctgcggcagaaatggcacttaatgatgagttgatgtggttgtggaagcgt
agcggtgctctttatccagctctctcactggagaagctgccagagggaactaaaggggcg
tggctttacgcaaccaatcagatcagagaggctttacgagtggcggctcttgcagggact
acctctgatcttcctgtgtttccattgatcaagattgtgtactcctcctctaattccttt
ctttcagagattgatctggtgaacacaattggagagagtgctgctatgggagcatctgga
gtcattatatgggaaaaatctttagcagttaaaacacagaaatcctgctcagagtttggc
tcatacgttcgtcaggttcttggcccatatgctgtcaatgtgaccactgcagcaaggctt
tgtggagtctcactgtgtcagggccgtggacgttgcgtgcgtaaaaatcctgaggacccc
acatacctgcatcttccttcagcccactttatgcttctcccaaatggagcagaaggtgtc
cgggccacgggagagctgcccaccgcttatatagacctctggaggaaggacttccgctgc
cagtggttcgaagccttggagggtgcagcagcggatcaagaatcaggcgtggtactggaa
aaccgaaggaaaataacatcaccaacagttaaaacaatgtttgggataagccaaagtcag
ggtacggtggttccagtgacagtagtgcctaccaagcagccagtggacggcggaaactct
gcactttatacaccctttatccttcttccgtcactggttcttcattatatttga
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